Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1459 ATGCAACGACGAGATATGACAGGAAGAAGACGAGACCTCCAAGAACTTCTCTCTTTGCAACTAAAGCACAATAACGACGAAGAACACAACATAAAGAGATCCAAAACTGAAAATCAATCAACTGAGCTTTTCGACTTGTTGCTCAAGTTTTCTTCCTCTGTGGTTCTTCTTCATTATGACCTCTTTTATACTGTTGATCTCGGCAATGTTCCTTCATCGCTCTCAATGACGGACTCTTCTCTATCATCCGCCTCCTCCGATTTCGGTTCCGTCAACACCGCCGATCAGAATGCGGAGCGGAGTCGGAGGAGTGGGGGCGTTACTGAAGTCGTGATCGTGCAGCAAACGCGTCGGTGGCATGACGTTTTCTGGTTAGGAATATTTTTGATTCATTTGATTGGCCTGGGGTTCCTTCTGGGGCTTGTCGGCCTCAATAGGTTTAAGAAGAAGAATAGACTTGATATTGATAGATATACTGCCCGGTTTTCGGAGAATAAAAACGGCTTGACCGAGGATTTCTGGCCTCTCTATGCTGTTGCCGGTGGAGTTGGGACTGTTCTTGGTTGTAGTTGGTTGTTGTTGCTGGGTTCTCGTGGCAGTCAAATGATGAAGGTCTCGGTCCACATCCTCACCACTTATCTTGCAGTGATCAGTGTTTTATGTTTCTGGACTGAACAGTTTTTCTGGGGAATCTTTTTTGCCATTGGGGCTGCTTTGCAGTTCTTGTACGTCATATCGGTCATAGACAGACTTCCATTTACCATGTTGGTTCTACAGAAGGCTGTGAAGATGGTGTGGAGTCTTCCTGAAGTTATGAGATTGGCATATGCATTTATGCTTGTTGTGCTATTATGGATGGCCTTGTGGTCTTTTGGAGCAGCTGGAGTTGTGGCCTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACTGGTGCAGTACTTTGTAATACAGTACATGTTATTGTGTCTGGGATGGTGTTTCTTGTTCTTATTCATGGTGGCAGAGAGGCGGCATCAATGCCAGCTAACGCTCTATTGAAATCTCTAAAGTATGCTTTAACTACATCTTTTGGCAGCATTTGTTATGGGTCATTATTTACAGCTGCTATTAGGACACTTCGTTGGAAGATAAGGGGATTTCGGTCAAAGATTGGAAAGAACGAGTGTCTACTTTGCTGTGTGGATTTCCTTTTTCATCTCGTGGAGACTCTTGTCCGTTTCTTCAACAAGTATGCCTATGTTCTGATTGCTGTTAATGGTAAAAATTTTAACCACTCGGCAAGAGATGCATGGGAGTTATTCCAGTCAACTGGAGTTGAAGCACTCATAGCCTATGATTGTTCTGGAGCTGTCCTGCTAATGGGCACCATTTTTGGTGGGCTGATTACTGGAACTTGCTCTGGTGTTTGGGCATGGTTGAAATGGAGTGACAGAGTACTTATGATTGGGTCCACGTCTATGTTGATGGGAATGGTCTTGGTAGGAGTGGCAATGGTAGTGGTGGAAAGTGCTGTTACATCCATTTATATCTGCTATGCAGAAGACCCCTTATTGATTCGTAGATGGGACACTGAATTTTTCAACCAGATGTCTGAGACACTACATCAGCGACTTCAACATCGAAGTTCACGAGCTAGCGAGGTTAGAATGTTATATCGGCTTGATGGGCTGGTTCAAGAAAATGGTTCAATTTGA 1725 0.4429 MQRRDMTGRRRDLQELLSLQLKHNNDEEHNIKRSKTENQSTELFDLLLKFSSSVVLLHYDLFYTVDLGNVPSSLSMTDSSLSSASSDFGSVNTADQNAERSRRSGGVTEVVIVQQTRRWHDVFWLGIFLIHLIGLGFLLGLVGLNRFKKKNRLDIDRYTARFSENKNGLTEDFWPLYAVAGGVGTVLGCSWLLLLGSRGSQMMKVSVHILTTYLAVISVLCFWTEQFFWGIFFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRLAYAFMLVVLLWMALWSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPANALLKSLKYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVLIAVNGKNFNHSARDAWELFQSTGVEALIAYDCSGAVLLMGTIFGGLITGTCSGVWAWLKWSDRVLMIGSTSMLMGMVLVGVAMVVVESAVTSIYICYAEDPLLIRRWDTEFFNQMSETLHQRLQHRSSRASEVRMLYRLDGLVQENGSI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1459 574 Pfam Plasma-membrane choline transporter 231 526 IPR007603 GO:0022857|GO:0055085
Lele52g1459 574 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 111 554 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1459 Lele-ChrLele52 18585139 18591480 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1459 52 18585139 18591480 Lele52g1459 52 18585139 18591480 ECH
Lele49g1323 49 9064518 9068281 Lele52g1459 52 18585139 18591480 hybridization
Lele50g1504 50 20203137 20207432 Lele52g1459 52 18585139 18591480 hybridization