Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1323 ATGGTTGGCTTCATCATGGCGCGTGGTGGTCAAGACCATCTATCTCATGGCCTGCAAAAAGTCCACCGAAAGCGACTGTGCCAAATCACGACCCACCAATACCTCTGCATTTCCCTGTTCCCTGATTCCTCCCTCTCTTTTCGACTTGGTTCTCAAGGTTTTTTCCTTCCTCTGTGGTTCTATCTCCATTATGACCTCTTTTATATTGTTGATCTCTGCAATGTTCCTTCGTCGCTCCCAATGACGGACTCTTCTCTATCATCCGCCTCCTCCGATTTCTGTTCCTTCAACACCTCCGATCAGAATGCGGGGAGGAGTCGGAGAAGTGGGGGCGTTAGTGAAGTCGTGATCGTGCAGCAGCAAACGCGTCGGTGGCATGACGTTTTCTGGTTAGGAATATTTTTGATTCATTTGATTGGCCTGGGGTTCCTTCTCGGACTTGTCGGCCTCAATAGGTTTAAGAAGAAGAATAGACTTAATATTGATAGATATACTGCCCGGTTTTCGGAGAATAAAAACGGCTTGACCGAGGATTTCTGGCCTCTCTATGCTGTTGCCGGTGGAGTTGGGACTGTTCTTGGATGGAGTTGGTTGTTGTTGTTGGGTTCTCGTGGCAGTCAAATGATGAAGGTCTCGGTCCACATCCTGACCAGTTATCTTGCAGTGATTAGTGTTTTGTGTTTCTGGGCTGAACAGTTTTTCTGGGGAGTCTTTTTTTCCATTGGAGCTGCTTTGCAGTTCTTGTACGTCATATCGGTCATAGACAGACTTCCATTTACCATGTTGGTTCTACAGAAGGCCGTGAAGATGGTGTGGAGTCTTCCTGAAGTCATGAGATTAGCATATGCATTTATGCTTGTTGTGCTCTTATGGATGGCCCTGTGGTCTTTTGGAGCAGCGGGAGTTGTGGCCTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACTGGTGCAGTACTTTGTAATACAGTGCATGTTATTGTGTCTGGGATGGTGTTTCTTGTACTTATTCATGGTGGCAGAGAGGCAGCATCAATGCCAGCTAACGCTCTATTGAAATCTCTTAAGTATGCTTTAACTACATCTTTTGGCAGCATTTGTTATGGTTCATTATTTACAGCTGCTATTAGGACACTTCGTTGGAAGATAAGGGGATTTCGGTCAAAGATTGGAAAGAATGAGTGTTTACTTTGCTGTGTGGATTTCCTTTTTCATCTTGTGGAGACTCTTGTCCGTTTCTTCAAGTATGCCTATGTTCTGATTGCTGTTAATGGTAAAAATTTTAACCATTCTGCTAGAGATGCATGGGAGTTATTCCAGTCAACTGGTGTTGAAGCACTCGTAGCGTATGATTGTTCTGGAGCAGTCCTGCTAATGGGCACTATTTTTGGTGGGCTGATTACTGGAACTTGCTCTGGTGTTTGGGCATGGTTCAAATGGAGTGACAGAGTACTTATGATTGGGTCCACGTCTATGTTGATGGGAATGGTCTTGGTAGGAGTGGCAATGGTAGTGGTTGAAAGTGCTGTTACATCCATTTATATCTGCTATGCAGAAGACCCCTTGTTGATTCGCAGATGGGACACGGAATTTTTCAACCAGATGTCTGAGACACTACATCAGCGACTTCAACATCGAAGTTCACGAGCTAGCGAGGTTAGAATGTTATATCGGCTTGATGGGCTGGGTCAAGAAAATGGTTCAATTTGA 1740 0.4506 MVGFIMARGGQDHLSHGLQKVHRKRLCQITTHQYLCISLFPDSSLSFRLGSQGFFLPLWFYLHYDLFYIVDLCNVPSSLPMTDSSLSSASSDFCSFNTSDQNAGRSRRSGGVSEVVIVQQQTRRWHDVFWLGIFLIHLIGLGFLLGLVGLNRFKKKNRLNIDRYTARFSENKNGLTEDFWPLYAVAGGVGTVLGWSWLLLLGSRGSQMMKVSVHILTSYLAVISVLCFWAEQFFWGVFFSIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRLAYAFMLVVLLWMALWSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPANALLKSLKYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGKNECLLCCVDFLFHLVETLVRFFKYAYVLIAVNGKNFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCSGVWAWFKWSDRVLMIGSTSMLMGMVLVGVAMVVVESAVTSIYICYAEDPLLIRRWDTEFFNQMSETLHQRLQHRSSRASEVRMLYRLDGLGQENGSI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1323 579 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 118 559 IPR007603 GO:0022857|GO:0055085
Lele49g1323 579 Pfam Plasma-membrane choline transporter 237 531 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1323 Lele-ChrLele49 9064518 9068281 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1323 49 9064518 9068281 Lele49g1323 49 9064518 9068281 ECH
Lele49g1323 49 9064518 9068281 Lele51g1330 51 9033070 9036439 hybridization
Lele49g1323 49 9064518 9068281 Lele52g1459 52 18585139 18591480 hybridization