Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1504 ATGACGGACTCTTCTCTATCATCCGCCTCCTCTGATGTCGGTTCCGTCAAAACCTCCGATCAGAATGCGGAGCGGAGTCGGAGGAGTGGGGGCGTTACTGAAGTCGTGATCGTGCAGCAAACGCGTCGGTGGCATGACGTTTTCTGGTTAGGAATATTTTTGATTCATTTGATTGGCCTGGGGTTCCTTCTGGGGCTTGTCGGCCTCAATAGGTTTAAGAAGAAGAATAGACTTGATATTGATAGATATACTGCCCGGTTTTCGGAGAATAAAAACGGCTTGACCGAGGATTTCTGGCCTCTCTATGCTGTTGCCGGTGGAGTTGGGACTGTTCTTGGATGTAGTTGGTTGTTGTTGCTGGGTTCTCGTGGCAGTCAAATGATGAAGGTCTCAGTCCACATCCTCACCACTTATCTTGCAGTGATCAGTGTTTTATGTTTCTGGGCTGAACAGTTTTTCTGGGGAGTCTTTTTTGCCATTGGGGCTGCTTTGCAGTTCTTGTACGTCATATCGGTCATAGACAGACTGCCATTTACCATGTTGGTTCTACAGAAGGCTGTGAAGATGGTGTGGAGTCTTCCTGAAGTTATGAGATTGGCATATGCATTTATGCTTGTTGTGCTCTTATGGATGGCCTTGTGGTCTTTTGGAGCAGCTGGAGTTGTGGCCTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACCGGTGCAGTACTTTGTAATACAGTACATGTTATTGTGTCTGGGATGGTGTTTCTTGTTCTTATTCATGGTGGCAGAGAGGCGGCATCAATGCCAGCTAACGCTCTATTGAAATCTCTAAAGTATGCTTTAACTACATCTTTTGGCAGCATTTGTTATGGGTCATTATTTACAGCTGCTATTAGAACACTTCGTTGGAAGATTAGGGGATTTCGGTCAAAGATTGGAAAGAACGAGTGTCTACTTTGCTGTGTGGATTTCCTCTTTCATCTCGTGGAGACTCTTGTCCGTTTCTTCAACAAGTATGCCTATGTTCTGATTGCTGTTAATGGTAAAAATTTTAACCATTCGGCAAGAGATGCATGGGAGTTATTCCAGTCAACTGGAGTTGAAGCACTCATAGCCTATGATTGTTCTGGAGCTGTCCTGCTAATGGGCACCATTTTTGGTGGGCTGATTACTGGAACTTGCTCTGGTGTTTGGGCATGGTTGAAATGGAGTGACAGAGTACTTATGATTGGATCCACGTCTATGTTGATGGGAATGGTCTTGGTAGGAGTGGCAATGGTAGTGGTGGAAAGTGCTGTTACATCCATTTATATCTGCTATGCAGAAGACCCCTTATTGATTCGTAGATGGGACACTGAATTTTTCAACCAGATGTCTGAGACACTACACCAGCGACTTCAACATCGAAGTTCGCGAGCTAGCGAGGTTAGAATGTTATATCGGCTTGATGGGCTGGTTCAAGAAAATGGTTCAATTTGA 1500 0.4507 MTDSSLSSASSDVGSVKTSDQNAERSRRSGGVTEVVIVQQTRRWHDVFWLGIFLIHLIGLGFLLGLVGLNRFKKKNRLDIDRYTARFSENKNGLTEDFWPLYAVAGGVGTVLGCSWLLLLGSRGSQMMKVSVHILTTYLAVISVLCFWAEQFFWGVFFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRLAYAFMLVVLLWMALWSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPANALLKSLKYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVLIAVNGKNFNHSARDAWELFQSTGVEALIAYDCSGAVLLMGTIFGGLITGTCSGVWAWLKWSDRVLMIGSTSMLMGMVLVGVAMVVVESAVTSIYICYAEDPLLIRRWDTEFFNQMSETLHQRLQHRSSRASEVRMLYRLDGLVQENGSI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1504 499 Pfam Plasma-membrane choline transporter 156 451 IPR007603 GO:0022857|GO:0055085
Lele50g1504 499 MobiDBLite consensus disorder prediction 1 26 - -
Lele50g1504 499 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 36 479 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1504 Lele-ChrLele50 20203137 20207432 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1504 50 20203137 20207432 Lele50g1504 50 20203137 20207432 ECH
Lele50g1504 50 20203137 20207432 Lele51g1330 51 9033070 9036439 hybridization
Lele50g1504 50 20203137 20207432 Lele52g1459 52 18585139 18591480 hybridization