Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1086 ATGCAAAAGGGGATCTCTCTCAAGCCTTTTCTTCAGAGGGATCCAAAGGCTGAAGGAGAAATGGGGTTGACATTCACTAAGCTTTTCAGTCGGCTTTTTGCCAAGAAAGAAATGCGAATTCTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATTTTGTACAAGCTCAAGCTTGGTGAGATTGTCACTACAATCCCTACTATTGGGTTCAATGTGGAGACTGTGGAATACAAAAACATTAGCTTCACCGTTTGGGATGTTGGGGGCCAAGATAAGATTCGTCCCCTGTGGAGGCATTACTTCCAGAACACACAGGGTCTTATATTTGTTGTAGACAGCAATGACAGAGATAGGGTTGTTGAGGCCAGAGATGAGTTACATAGGATGTTGAATGAGGATGAATTGAGAGATGCAGTATTGCTTGTATTTGCCAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGATAAGCTGGGTCTCCACTCTCTCAGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCTACCTCTGGGGAAGGCCTTTATGAGGGTCTGGATTGGCTCTCCAACAACATTGCCAACAAGGCTTAA 606 0.4521 MQKGISLKPFLQRDPKAEGEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1086 201 ProSiteProfiles small GTPase Arf family profile. 31 197 - -
Lele52g1086 201 PANTHER ADP RIBOSYLATION FACTOR-RELATED 21 196 IPR024156 GO:0005525
Lele52g1086 201 TIGRFAM small_GTP: small GTP-binding protein domain 36 177 IPR005225 GO:0005525
Lele52g1086 201 FunFam ADP-ribosylation factor 1 21 201 - -
Lele52g1086 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 199 IPR027417 -
Lele52g1086 201 PRINTS GTP-binding SAR1 protein signature 139 160 IPR006689 GO:0003924|GO:0005525
Lele52g1086 201 PRINTS GTP-binding SAR1 protein signature 39 62 IPR006689 GO:0003924|GO:0005525
Lele52g1086 201 PRINTS GTP-binding SAR1 protein signature 67 91 IPR006689 GO:0003924|GO:0005525
Lele52g1086 201 PRINTS GTP-binding SAR1 protein signature 94 119 IPR006689 GO:0003924|GO:0005525
Lele52g1086 201 Gene3D - 24 201 IPR027417 -
Lele52g1086 201 SMART arf_sub_2 21 201 - -
Lele52g1086 201 SMART rab_sub_5 38 200 - -
Lele52g1086 201 SMART sar_sub_1 21 197 IPR006689 GO:0003924|GO:0005525
Lele52g1086 201 CDD Arf1_5_like 38 196 IPR045872 GO:0003924
Lele52g1086 201 Pfam ADP-ribosylation factor family 25 197 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1086 Lele-ChrLele52 7307218 7311070 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1086 52 7307218 7311070 Lele52g1086 52 7307218 7311070 ECH
Lele49g1031 49 6612469 6615733 Lele52g1086 52 7307218 7311070 hybridization
Lele50g1123 50 7383819 7388836 Lele52g1086 52 7307218 7311070 hybridization