Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1063 ATGGATTTTCACACGCAATTTGGCGAGGTTGATGTTGTGAGAAGACAAGGCAGAGATTTCTCAAGCATGGATTTTAGCTGGTGTTTGAGCTCTTCTTCTTCAACTTCAATCATGTCTTCTCTTGTACATTTCCTTCTTCTTTTTGCATCTTTGGTTTGTTCTTGTCCTGTCGTCGTTTGTTCATCAGAAATGGTAAATCAGACCTTTCGCCCAGACCAAGAGGTCCACAAGTTGAGAACCATAAGAACTCGTCTCCAACAGATCAACAAGCCCCCTGTTAAGATAATTCAGAGTCCTGACGGTGATATCATAGATTGTGTTGTGTCTCATCATCAACCTGCTTTCGATCATCCCATGTTAAGAGGACAGAAACCACTGGATCCTCCGGAGAGACCAAAAGGGCACGATAAAAGGGGTTTTAGGATGGGTGAGAATTTCCAGTTATGGAGGTTGTCTGGAGAATCATGTCCAGAAGGAACGATTCCGATCAGAAGAACAAAAGAAGAAGATGTTTTAAGAGCAAGCTCTGTTCAAAGATTCGGAAGAAAATTGCCAAAACCTGTTAGAAGAGACACCAACACAAACGGACACGAGCATGCAGTAGGGTATGTGAGTGGAGAAGAGTATTATGGGGCAAAAGCAAGCATAAACGCGTGGGCCCCAAGTGTGGCGAATCAATATGAATTCAGTTTGTCTCAAATTTGGGTAATCTCTGGTTCTTTTGGGGATGATCTCAACACCATTGAAGCTGGCTGGCAGGTCAGCCCAAAACTGTATGGAGATAATTACTCCAGATTCTTTACCTACTGGACGAGTGATGCATATCAAGCAACAGGGTGCTACAATTTACTATGCTCTGGCTTTGTTCAGACCAACAATAAAATAGCCATTGGGGCTGCAATCTCACCCACTTCTTCCTACAATGGTGGCCAATTTGATATTAGCTTAGCCATTTGGAAGGATCCTAAGCATGGGAATTGGTGGCTTGAATTCGGGTCGGGTATTCTCGTCGGGTACTGGCCGTCATTTTTGTTCACGCATCTACAGGATCATGCAAGCATGGTACAATTTGGAGGAGAAGCAGTGAATTCGGATCCCTCCGGGTCGCATACTTCGACCCAGATGGGAAGCGGGCATTTTGCGGGTGAAGGGTTCGGAAAAGCCTCGTATTTTCGGAACTTACAAGTTGTGGATTGGGACAACAACTTGATTCCGGTGACGAATCTTCGGGTCTTGGCGGATCACCCGAATTGTTATGATATCCAAGGAGGGATTAATAATGTATGGGGGAACTACTTTTACTACGGTGGACCTGGGAAAAATGATAGGTGTCCTTGA 1338 0.4462 MDFHTQFGEVDVVRRQGRDFSSMDFSWCLSSSSSTSIMSSLVHFLLLFASLVCSCPVVVCSSEMVNQTFRPDQEVHKLRTIRTRLQQINKPPVKIIQSPDGDIIDCVVSHHQPAFDHPMLRGQKPLDPPERPKGHDKRGFRMGENFQLWRLSGESCPEGTIPIRRTKEEDVLRASSVQRFGRKLPKPVRRDTNTNGHEHAVGYVSGEEYYGAKASINAWAPSVANQYEFSLSQIWVISGSFGDDLNTIEAGWQVSPKLYGDNYSRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYNGGQFDISLAIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLQDHASMVQFGGEAVNSDPSGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPVTNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGKNDRCP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1063 445 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 81 441 - -
Lele52g1063 445 FunFam Putative carboxyl-terminal proteinase 218 337 - -
Lele52g1063 445 Pfam Neprosin 227 438 IPR004314 -
Lele52g1063 445 MobiDBLite consensus disorder prediction 123 139 - -
Lele52g1063 445 Pfam Neprosin activation peptide 96 203 IPR025521 -
Lele52g1063 445 MobiDBLite consensus disorder prediction 117 139 - -
Lele52g1063 445 Gene3D - 220 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1063 Lele-ChrLele52 7081662 7086063 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1063 52 7081662 7086063 Lele52g1063 52 7081662 7086063 ECH
Lele49g1008 49 6403446 6407894 Lele52g1063 52 7081662 7086063 hybridization
Lele50g1101 50 7158939 7163558 Lele52g1063 52 7081662 7086063 hybridization