Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1101 ATGGATTATCACACGCAGTTTGGTGAGGTTGATGTTGTGAGAAGACAAGGCAGAGATTTCTCAAGGATGGATTTTAGCTGGTGTTTGAGCTCTTCTTCTTCAACTTCAATCACGTCTTCTCTTGTACATTTCCTTCTTCTTTTTGCATCTTTGGTTTGTCCTTGTCCTGTCGTCGTTTGTTCATCAGAAATGGTGAATCAGACCTTTCGCCCAGAAGAGGTCCACAAGTTGAGAAACATAAGAACTCGTCTCCAACAGATCAACAAGCCCCCTGTTAAGATAATTCAGAGTCCTGACGGTGACATCATAGATTGTGTTGTGTCTCATCATCAACCTGCTTTCGATCATCCCATGTTAAGAGGACAGAAACCACTGGATCCTCCGGAGAGACCAAAAGGGCATGATAAAAGGGGTTTTAGGATGGGTGAGAATTTCCAGTTATGGAGGTTGTCTGGAGAATCATGTCCAGAAAGAACGATTCCGATCAGAAGAACAAAAGAAGAAGATGTTTTAAGAGCAAGCTCTGTTCAAAGATTCGGAAGAAAATTGCCAAAACCTGTTAGAAGAGACACCAACCCAAACGGACACGAGCATGCAGTAGGGTATGTGAGTGGAGAAGAGTACTATGGGGCAAAAGCAAGCATAAACGTGTGGGCCCCAAGTGTGGCGAATCAATATGAATTCAGCTTGTCTCAAATTTGGGTAATCTCTGGTTCTTTTGGGGATGATCTCAACACCATTGAAGCTGGCTGGCAGACCAACAATAAAATAGCAATTGGGGCTGCAATCTCACCCACTTCTTCCTACAATGGTGGCCAATTTGATATTAGCTTAGCCATTTGGAAGGATCCTAAGCATGGGAATTGGTGGCTTGAATTCGGATCGGGTATTCTCGTCGGGTACTGGCCGTCATTTTTGTTCACGCATCTACAGGATCATGCAAGTATGGTACAATTTGGAGGAGAAGTAGTGAATTCGGATCCCTCCGGGTCTCATACTTCGACCCAGATGGGAAGCGGGCATTTTGCGGGTGAAGGGTTCGGAAAAGCCTCGTATTTTCGGAACTTACAAGTTGTGGATTGGGACAACAACTTGATTCCGTTGACGAATCTTCGGGTCTTGGCGGATCACCCGAATTGTTATGATATCCAAGGAGGGATTAATAATGTGTGGGGGAACTACTTTTACTACGGTGGACCTGGGAAAAATGATAGGTGTCCTTGA 1224 0.4461 MDYHTQFGEVDVVRRQGRDFSRMDFSWCLSSSSSTSITSSLVHFLLLFASLVCPCPVVVCSSEMVNQTFRPEEVHKLRNIRTRLQQINKPPVKIIQSPDGDIIDCVVSHHQPAFDHPMLRGQKPLDPPERPKGHDKRGFRMGENFQLWRLSGESCPERTIPIRRTKEEDVLRASSVQRFGRKLPKPVRRDTNPNGHEHAVGYVSGEEYYGAKASINVWAPSVANQYEFSLSQIWVISGSFGDDLNTIEAGWQTNNKIAIGAAISPTSSYNGGQFDISLAIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLQDHASMVQFGGEVVNSDPSGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPLTNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGKNDRCP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1101 407 MobiDBLite consensus disorder prediction 122 138 - -
Lele50g1101 407 Pfam Neprosin activation peptide 95 202 IPR025521 -
Lele50g1101 407 MobiDBLite consensus disorder prediction 116 138 - -
Lele50g1101 407 Pfam Neprosin 252 400 IPR004314 -
Lele50g1101 407 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 252 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1101 Lele-ChrLele50 7158939 7163558 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1101 50 7158939 7163558 Lele50g1101 50 7158939 7163558 ECH
Lele50g1101 50 7158939 7163558 Lele51g1029 51 6524837 6529354 hybridization
Lele50g1101 50 7158939 7163558 Lele52g1063 52 7081662 7086063 hybridization