Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0948 ATGGCAATGAGCAGCCATGCTATCGGAGCCATCAACTTCGTTGCAGTACTACTGGCGATTCCAATAATCGGCGCTGGAATCTGGCTAATGAACGAGCCTGCAAATACCTGCGTGAAGACTCTACAATGGCCGGTTATAATACTTGGGGTTCTCATACTGGTGGTGGCTCTAGCTGGCTTCATAGGAGGGTTCTGGAGAATCCAATGGCTCCTCATTCTCTACATGGTCGCCATGCTCGTCCTCATCATACTTCTGGTTTGCTTGGCGGTGTTCATCTACATGGTCACCCTCAGAGGCCACGGCGACATCGAACCCAACCGAGCTTACTTGGAATACCACCTCGACAACTTCTCCGGCTTTCTCCGCCGCCGCGTCAGGAGTTCCTATAAATGGGACGGCATCAGAAGCTGCCTTAGCTCCTCCAATATGTGTAATGAGCTTAACCAGAGTTACCGCATGGCTCAGGACTTCTTCAACGCACATCTAACACCCATGCAGTCAGGATGCTGTAAGCCACCAACACAATGTGGGTACACGTTTGTGAATCCGACATACTGGATAAGTCCCATAAATAATGCAGCTGATATGGATTGCCTTCAATGGAGCAACGACCAGACACAAGTGTGCTACAACTGCGACTCCTGCAAAGCTGGGTTACTGGCAAATCTCAGGAAGGAATGGAAGAGGGCTAATGTCGTTTTGATCATAACTGCCATCGTTTTAATCCTAACTTATCTGATAGGGTGCTGTGCCTTCAGGAATGCCAAAACTGACGAGATCTTCAGCAAATACAGGCAAGGCTACACTTGA 810 0.4901 MAMSSHAIGAINFVAVLLAIPIIGAGIWLMNEPANTCVKTLQWPVIILGVLILVVALAGFIGGFWRIQWLLILYMVAMLVLIILLVCLAVFIYMVTLRGHGDIEPNRAYLEYHLDNFSGFLRRRVRSSYKWDGIRSCLSSSNMCNELNQSYRMAQDFFNAHLTPMQSGCCKPPTQCGYTFVNPTYWISPINNAADMDCLQWSNDQTQVCYNCDSCKAGLLANLRKEWKRANVVLIITAIVLILTYLIGCCAFRNAKTDEIFSKYRQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0948 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
Lele52g0948 269 PRINTS Transmembrane four family signature 6 29 - -
Lele52g0948 269 PRINTS Transmembrane four family signature 38 64 - -
Lele52g0948 269 PRINTS Transmembrane four family signature 65 93 - -
Lele52g0948 269 Pfam Tetraspanin family 8 251 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0948 Lele-ChrLele52 6173793 6174693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0948 1 269 Miscellaneous Gene Families AT5G46700 68.401 3.15e-132 373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0948 52 6173793 6174693 Lele52g0948 52 6173793 6174693 ECH
Lele49g0916 49 5720883 5721807 Lele52g0948 52 6173793 6174693 hybridization
Lele50g0971 50 6149653 6151004 Lele52g0948 52 6173793 6174693 hybridization