Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0916 ATGGCACTGAGCAACCATGCTATCGGAGCCATCAACTTCGTCGCTGTACTACTGGCGATTCCAATAATCGGCGCCGGAATCTGGCTAATGAACGAGCCTGCAAATGCCTGCGTGAAGACTCTACAATGGCCGGTCATAATACTTGGGGTTCTCATACTGGTGGTGGCTCTAGCTGGCCTCATCGGAGGGTTCTGGAGAATCCAATGGCTCCTCATTCTCTACATGGTCGCCATGATCGTCCTCATCATACTTCTGGTCTGCTTGGCAGTGTTCATCTACATGGTCACCCTCAGAGGCCACGGCGACATTGAACCTAACCGAGCTTACTTGGAATACCACCTCGACAACTTCTCCGGCTTTCTCCGCCGCCGCGTCAGGAGTTCCTATAAATGGGACAGCATCAGAAGCTGCCTCAGCTCCTCCAACATGTGTAATGAGCTGAACCAGAGTTACCGCATGGCTCAGGACTTCTTCAACGCACATCTAACACCCATGCAGTCAGGATGCTGTAAGCCACCAACACAATGTGGTTACACGTTTGTGAATCCGACCTACTGGATAAGCCCTATCAACAATGCAGCTGATATGGATTGCCTTCAATGGAGCAACGACCAGACACAAGTGTGCTACAACTGCGACTCGAATGCCAAAACTGATGAGATGTTCAGCAAATACAGGCAAGGCTACACTTGA 693 0.5065 MALSNHAIGAINFVAVLLAIPIIGAGIWLMNEPANACVKTLQWPVIILGVLILVVALAGLIGGFWRIQWLLILYMVAMIVLIILLVCLAVFIYMVTLRGHGDIEPNRAYLEYHLDNFSGFLRRRVRSSYKWDSIRSCLSSSNMCNELNQSYRMAQDFFNAHLTPMQSGCCKPPTQCGYTFVNPTYWISPINNAADMDCLQWSNDQTQVCYNCDSNAKTDEMFSKYRQGYT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0916 230 PRINTS Transmembrane four family signature 6 29 - -
Lele49g0916 230 PRINTS Transmembrane four family signature 65 93 - -
Lele49g0916 230 PRINTS Transmembrane four family signature 38 64 - -
Lele49g0916 230 Pfam Tetraspanin family 7 213 IPR018499 GO:0016020
Lele49g0916 230 PANTHER TETRASPANIN-8-RELATED 1 215 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0916 Lele-ChrLele49 5720883 5721807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0916 1 230 Miscellaneous Gene Families AT5G46700 59.851 9.45e-110 314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0916 49 5720883 5721807 Lele49g0916 49 5720883 5721807 ECH
Lele49g0916 49 5720883 5721807 Lele51g0932 51 5813795 5814304 hybridization
Lele49g0916 49 5720883 5721807 Lele52g0948 52 6173793 6174693 hybridization