Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0971 ATGTGTGAGTCACGGAGGGGTGTGTGTGAAAATAAGTCAAGCTGGAATCTGCAAAAGCATCAGAACTCATCAATGCTTTCTTCTGATTTTCTGTCCAAGGCTAGCTGATACCATCTTTGTATTGGAAGAAGAAAGCAACCAAACCCCATCAAGCTCGCTCCTTCTGATTCTCGGAAGATGGCACTGAGCAGCCATGCTATCGGAGCCATCAACTTCGTTGCAGTACTACTGGCGATTCCAATAATCGGTGCTGGAATCTGGCTAATGAACGAGCCTGCAAATACCTGCGTGAAGACTCTACAATGGCCGGTTATAATACTTGGGGTTCTCATACTGGTGGTGGCTCTGGCTGGCTTCATCGGAGGGTTCTGGAGAATCCAATGGCTCCTCATTCTCTACATGGTCGCCATGCTCGTCCTCATCATTCTTCTGGTTTGCTTGGCGGTGTTCATCTACATGGTCACCCTCAGAGGCCACGGCGACATCGAACCCAACCGAGCTTACTTGGAATACCACCTCGACAACTTCTCCGGCTTTCTCCGCCGCCGCGTCAGGAGTTCCTATAAATGGGACAGAATCAGAAGCTGCCTTAGCTCCTCCAATATGTGTAATGAGCTTAACCAGAGTTACCGCATGGCTCAGGACTTCTTCAACGCACATCTAACACCCATGCAGTCAGGATGCTGTAAGCCACCAACACAATGTGGGTACACGTTTGTGAATCCGACATACTGGATAAGTCCCATAAATAATGCAGCTGATATGGATTGCCTTCAATGGAGCAACGACCAGACACAAGTGTGCTACAACTGCGACTCGTGCAAAGCTGGGTTACTGGCAAATCTCAGGAAGGAATGGAAGAGGGCTAATGTCGTTTTGATCATAACTGCCATCGTTTTAATCCTAACTTATCTGATAGGGTGCTGTGCCTTCAGGAATGCCAAAACTGACGAGATCTTCAGCAAATACAGGCAAGGCTACACTTGA 987 0.4813 MCESRRGVCENKSSWNLQKHQNSSMLSSDFLSKASXYHLCIGRRKQPNPIKLAPSDSRKMALSSHAIGAINFVAVLLAIPIIGAGIWLMNEPANTCVKTLQWPVIILGVLILVVALAGFIGGFWRIQWLLILYMVAMLVLIILLVCLAVFIYMVTLRGHGDIEPNRAYLEYHLDNFSGFLRRRVRSSYKWDRIRSCLSSSNMCNELNQSYRMAQDFFNAHLTPMQSGCCKPPTQCGYTFVNPTYWISPINNAADMDCLQWSNDQTQVCYNCDSCKAGLLANLRKEWKRANVVLIITAIVLILTYLIGCCAFRNAKTDEIFSKYRQGYT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0971 328 Pfam Tetraspanin family 67 310 IPR018499 GO:0016020
Lele50g0971 328 PRINTS Transmembrane four family signature 124 152 - -
Lele50g0971 328 PRINTS Transmembrane four family signature 97 123 - -
Lele50g0971 328 PRINTS Transmembrane four family signature 65 88 - -
Lele50g0971 328 PANTHER TETRASPANIN-8-RELATED 60 317 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0971 Lele-ChrLele50 6149653 6151004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0971 60 328 Miscellaneous Gene Families AT5G46700 69.145 5.27e-133 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0971 50 6149653 6151004 Lele50g0971 50 6149653 6151004 ECH
Lele50g0971 50 6149653 6151004 Lele51g0932 51 5813795 5814304 hybridization
Lele50g0971 50 6149653 6151004 Lele52g0948 52 6173793 6174693 hybridization