Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0906 ATGGATCGAAATGGGGGAGAGAGCTGGAGGGAATTGATGAAGAAGATGATTCCTCCTGGAGCTTCTCTTCCAGATGATGCTTCTGATCTTGACTACTCCATAGCCATAGAATATCAGGGTCCACCAGTTTCATATGAAGTACCAAGAGTTGATCCTCTTAATATGAAATCTCGAAGAGTTTCACGTTCTGAATCACAACAATCCATTTCTCGTGGGAGGCCTCCAGTAATTGAACCAATTCCTCTGCCAGTGTCTCGTATTGCTGGTGTAACAGGTTCTCCTAATCAAAGTCCTGGGATATCAGGAAGTTCAGAATCTGTAGTGTCTGTCTTGCAAAATCCTGACTCTTCTTCTGCTTCGGCTTCAGCATCGCCTGGTTCGGCTCATAATCCTCCTAGGCAAGAGGTTAATGAACCAAGGAGGGCATCTGTGGTCACTTTTAATACTGTTGATAGATCTCAAATGAAGGAAGCTGAAATTATGAAGCCAGTTTATCCAGAATATGTTGGGGTTTCAAAGGAAAGGAAAAAAAAGAAATTCAGAGTTTGTTATAGATGTGGAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAGTATTGTAGAAATTGTGTGCTCAGGGCCATGGGATCAATGCCTGAAGGACGCAAATGCGTAACTTGCATTGGCCAGCCTATAGATGAATTGAAGCGCATGAAATTAGGTAAACATTCAAGAGTATTATCTCGACTTCTTATTCCTCTCGAAGTTAAGCAAATTATGAGAGCAGAGAAGGAATGCTCTGCTAATCAGCTTCGGCCGGAGCAGCTGATGGTTAATGGATTCCCGCTGAAGCCTGAAGAGATGGCAGAATTACTTGGGTGCCCCTTACCTCCACGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAAAATCATAAGTTCAAACTTGAACTTCACTGGGAAACTTTGTGCTGATGCTAGTAATGGAAACACAAAAGTTTACATCAATGGTCGAGAGATTACAAAGCTTGAATTGAGGATACTAAAGCTGGCAAATGTACAGTGTCCACGTGATACCCACTTTTGGGTTTATGAGGATGGTCGTTATGAGGAAGAAGGTCAGAATAATATCAGAGGAAAAATTTGGGATAAGGCTTCAACAAGATTTGTTAGTACTTTGTTCTCTTTACCCTTTCCCAATGGAAAGCCTCATGTGCCAAGAGATGAGATTAGTAATTTTTCTACTGTTCCAAAATATCTGGAACAGAAAAAGGTTCAGAAGCTTCTTCTTCTTGGACTTCAAGGATCAGGAACTAGCACGATCTTTAAGCAGGCCAAATTCTTGCATGGGAGCAGATTTACCGAAGAAGAGCTACAGGATATCAAACTGATGATACAGAGTAACATGTACAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGCTTCGAGGAGGAGGATCTTTCTGAAATGAACGCGGAAAGTTCTTCTGGTCAAACTATGGGACAAGTTGGGAACAGTGAATCAAATGAAACTAGTCTATGCATCTATTCACTCAACCCGAGGCTGAAGCATTTCTCTGATTGGCTCCTGGATATTATAGCTACTGGGGATTTAGATGCATTCTTCCCAGCAGCCACGCGTGAGTATGCACCATTAGTTGAAGAAGTGTGGAAGGATCCAGCAATACAAGAAACCTATAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTGACAGAATATTTCTTAAGCCGGGCCATTGAGATATCCAGCAATGAATACGAACCATCTGAAAGAGACATCATATATGCAGAAGGGGTTACTCAGGGGAATGGTTTAGCTTGCATAGAATTCTCACTTGATGATCGTAGCCCAATGTCTGAGGTTTACACGGAAAATATGGAAACTCAGCCACCACCTCTGACCAAGTACCAACTAATAAGAGTAAATGCCAAGGGGATGAATGAAGGTTGTAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCTGTGGTCTTCTGCCTCGCGCTGAGCGACTATGACCAGTTGTGGCTTGCCCCAGAAGGCAGTGGCAGTGGAAGCCTTCTGCAAAACAAGATGCTACAGAGCAAGGAACTATTTGAGACAATGGTGAAGCACCCTTGCTTCAAAGACACTCCTTTTGTATTGATTCTGAACAAACATGATATCTTTGAGGAAAAGGTCAATAGGGTTCCTCTATCTGCCTGTGAGTGGTTCAATGACTTTTGTCCTGTGAGTGCTCATCACAATAGCCAGTCACTGGCACATCAGGCTTACTTCTACATTGCCATGAAATTCAAAGACCTTTACACTTCCCTTACCGACAGGAAACTTTTCGTGTGGCAAGGCCGGGCAAGGGACCGTGTGACCATTGACGAGGCCTTCAAGTACATAAGGGAGGTCCTCAAGTGGGATGAGGAAAAAGAGGAGAATTACTATGGTCAACCTGAAGATTCATTTTACAGTACTACAGACATAAGCTCCTCTCCTTATATCAGACAAGAGTAA 2565 0.4277 MDRNGGESWRELMKKMIPPGASLPDDASDLDYSIAIEYQGPPVSYEVPRVDPLNMKSRRVSRSESQQSISRGRPPVIEPIPLPVSRIAGVTGSPNQSPGISGSSESVVSVLQNPDSSSASASASPGSAHNPPRQEVNEPRRASVVTFNTVDRSQMKEAEIMKPVYPEYVGVSKERKKKKFRVCYRCGKGKWETKESCLVCDAKYCRNCVLRAMGSMPEGRKCVTCIGQPIDELKRMKLGKHSRVLSRLLIPLEVKQIMRAEKECSANQLRPEQLMVNGFPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDKIISSNLNFTGKLCADASNGNTKVYINGREITKLELRILKLANVQCPRDTHFWVYEDGRYEEEGQNNIRGKIWDKASTRFVSTLFSLPFPNGKPHVPRDEISNFSTVPKYLEQKKVQKLLLLGLQGSGTSTIFKQAKFLHGSRFTEEELQDIKLMIQSNMYKYLSILLDGRERFEEEDLSEMNAESSSGQTMGQVGNSESNETSLCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPDVTEYFLSRAIEISSNEYEPSERDIIYAEGVTQGNGLACIEFSLDDRSPMSEVYTENMETQPPPLTKYQLIRVNAKGMNEGCKWVEMFEDVRAVVFCLALSDYDQLWLAPEGSGSGSLLQNKMLQSKELFETMVKHPCFKDTPFVLILNKHDIFEEKVNRVPLSACEWFNDFCPVSAHHNSQSLAHQAYFYIAMKFKDLYTSLTDRKLFVWQGRARDRVTIDEAFKYIREVLKWDEEKEENYYGQPEDSFYSTTDISSSPYIRQE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0906 854 SMART galpha_1 426 821 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 PRINTS Alpha G protein (transducin) signature 607 629 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 PRINTS Alpha G protein (transducin) signature 439 454 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 PRINTS Alpha G protein (transducin) signature 733 742 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 PRINTS Alpha G protein (transducin) signature 680 708 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 Gene3D - 466 618 IPR011025 GO:0007165
Lele52g0906 854 FunFam Extra-large guanine nucleotide-binding protein 3 466 618 - -
Lele52g0906 854 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 213 825 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 SUPERFAMILY Transducin (alpha subunit), insertion domain 465 617 IPR011025 GO:0007165
Lele52g0906 854 ProSiteProfiles G-alpha domain profile. 436 832 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 MobiDBLite consensus disorder prediction 1 27 - -
Lele52g0906 854 SUPERFAMILY FYVE/PHD zinc finger 153 226 IPR011011 -
Lele52g0906 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 827 IPR027417 -
Lele52g0906 854 CDD G-alpha 451 824 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 MobiDBLite consensus disorder prediction 43 141 - -
Lele52g0906 854 MobiDBLite consensus disorder prediction 835 854 - -
Lele52g0906 854 MobiDBLite consensus disorder prediction 832 854 - -
Lele52g0906 854 MobiDBLite consensus disorder prediction 89 131 - -
Lele52g0906 854 Pfam G-protein alpha subunit 434 820 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele52g0906 854 Gene3D - 628 830 IPR027417 -
Lele52g0906 854 FunFam Extra-large guanine nucleotide-binding protein 3 632 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0906 Lele-ChrLele52 5863484 5868470 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0906 52 5863484 5868470 Lele52g0906 52 5863484 5868470 ECH
Lele49g0883 49 5457661 5461909 Lele52g0906 52 5863484 5868470 hybridization
Lele50g0924 50 5823220 5827828 Lele52g0906 52 5863484 5868470 hybridization