Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0883 ATGGATCGAAATGGGGGAGAGAGCTGGAGGGAATTGATGAAGAAGATGTTTCCTCCTGGAGCTTCTCTGCCCGATGATGCTTCTGATCTTGACTACTCCATAGCCATAGAATATCAGGGCCCGCCAGTTTCATATGAAGTACCAAGAGTTGATCCTCTTAATATGAAATCCCGAAGAGTTTCACGTTCTGAATCACAACAATCCATTTCTCATAGGAGGCCTCCAGTAATTGAACCAATTCCTCTGCCAGTGTCTCGTATTGCTGGCGTGACAGGTTCTCCTAATCAAAGTCCTAGGATATCAGGAAGTTCAGAATCTGTAGTGTCTGTCTTGCAAAATCCTGACTTTTCTTCTGCTTCAGCTTCACCTGGTTCAGCTCATAATCCTCCCAGGCAAGAGGTTAACGAACCAAGGAGGACCTCTGTTGTCACTTTTAATACTGTTGATAGGTCTCAAAAGAAGGAAGCTGAAGTTATGAAGCCAGTTTATCCAGAATATGTTGGGGTCTCAAAGGAAAGGAAGAAAAAGAAATTCAGAGTTTGTTATAGATGTGAAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAGTATTGTAGCAATTGTGTGCTTAGGGCCATGGGATCAATGCCTGAAGGACGCAAATGTGTAACTTGCATTGGTCAGCCGATAGATGAATCGAAGCGTATGAAATTAGGTAAACATTCAAGAGTATTATCTCGACTTCTTATTCCTCTAGAAGTTAAGCAAATTATGAGAGCAGAGAAGGAGTGCTCTGCTAATCAGCTTCGGCCAGAGCAGCTGATGGTTAATGGATTCCCGCTGAAGCCTGAAGAGATGGCAGAATTACTTGGGTGCCCCTTACCTCCACGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAAAATCATTAGTTCAAACTTGAACTTCACTGGGAAACTTTGTGCTGATGCTAGTAATGGAAACACAAAAGTTTACATCAATGGTCGAGAGATTACAAAGCTTGAATTGAGGATACTAAGGCTGGCAAATGTACAGTGTCCACGTGATACCCACTTTTGGGTTTATGAGGATGGTCGTTATGAGGAAGAAGGTCAGAATAATATCAGAGGAAAAATTTGGGATAAGGCTTCAACAAGATTTGTTTGTACCCTGTTCTCTTTACCCTTTCCCCATGGAAAGTCTCACGCTCCAAGAGATGAGATTAGTAACTTTTCTACTGTTCCAAAGTATCTGGAAAAGAAAAAGGTTCAGAAGCTTCTTCTTCTTGGACTTCAAGGATCAGGAACTAGCACTATCTTTAAGCAGGCCAAATTCTTGTATGGGAGCAGATTTACCGAAGAAGAGCTACAGGATATCAAACTGATGATACAGAGTAACATTTACAAATATCTTAGCATTTTGCTTGATGGACGAGAGCGCTTCGAGGAGGAGGCTCTTTCAGAAATGAATATGCAAAGTTCTTCTGGTCAAACTATGGGACAAGTTGGGAACAGTGAATCAAACGAAACTCGTCTATGCATCTATTCACTCAACCCGAGGCTGAAGCATTTCTCTGATTGGCTTCTGGATATTATAGCTACTGGGGATTTAGATGCATTCTTCCCAGCAGCTACACGTGAGTATGCACCATTAGTTGCAGAAGTGTGGAAGGACCCGGCAATACAAGAAACCTATAAAAGAAGAGATGAGCTTCACTTTCTTCCAGATGTGACAGAATATTTCTTAAGCCGGGCTATTGAGATATCCTGCAATGAATACGAACCATCTGAAAGAGACATCATATATGCAGAAGGGGTTACTCAGGGGAATGGCTTAGCTTACATAGAATTCTCACTTGATGACCGTAGCCCGATGTCTGAAGTTTACACAGAAAATATGGAAACTCAGCCACCACCTCTGACAAAGTACCAACTAATAAGAGTAAATGCCAAGGGGATGAATGAAGGTTGTAAGTGGGTTGAAATGTTTGAAGATGTTCGTGCTGTGATCTTCTGTGTCGCGCTGAGCGACTATGACCATTTATGGCTTGCCCCAGGCAACAGTGGCAGTGGAAGCCTTCTGCAAAACAAGATGCTACAGAGCAAGGAACTATTTGAGACAATGGCGAGGCACCCTTGCTTCAAAGACAGTCCATTTGTGTTGATTCTGAACAAATATGATATCTTTGAGGAAAAGGTAAATAGGGTGCCTTTATCTTCCTGTGAGTGGTTCAATGACTTTAGTCCTGTGAATGCTCATCACAATAGCCAGTCACTGGCACATCAGGCTTACTTCTACATTGCCATGAAATTCAAAGACCTTTATGCTTCCCTCACAAGCCAGAAACTTTTCGTGTGGCAAGGCCGGGCAAGGGACCGCGTGACCGTTGACGAGGCTTTCAAGTACACAAGGGAGGTCCTCAAGTGGGATGAGGAAAAAGAGGAGAATTACTATGGTCAACCTGAAGATTCATTTTACAGTACTACAGACATAAGCTCCTCCCCTTATATCAGACAAGAGTAA 2559 0.4283 MDRNGGESWRELMKKMFPPGASLPDDASDLDYSIAIEYQGPPVSYEVPRVDPLNMKSRRVSRSESQQSISHRRPPVIEPIPLPVSRIAGVTGSPNQSPRISGSSESVVSVLQNPDFSSASASPGSAHNPPRQEVNEPRRTSVVTFNTVDRSQKKEAEVMKPVYPEYVGVSKERKKKKFRVCYRCEKGKWETKESCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRMKLGKHSRVLSRLLIPLEVKQIMRAEKECSANQLRPEQLMVNGFPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDKIISSNLNFTGKLCADASNGNTKVYINGREITKLELRILRLANVQCPRDTHFWVYEDGRYEEEGQNNIRGKIWDKASTRFVCTLFSLPFPHGKSHAPRDEISNFSTVPKYLEKKKVQKLLLLGLQGSGTSTIFKQAKFLYGSRFTEEELQDIKLMIQSNIYKYLSILLDGRERFEEEALSEMNMQSSSGQTMGQVGNSESNETRLCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVAEVWKDPAIQETYKRRDELHFLPDVTEYFLSRAIEISCNEYEPSERDIIYAEGVTQGNGLAYIEFSLDDRSPMSEVYTENMETQPPPLTKYQLIRVNAKGMNEGCKWVEMFEDVRAVIFCVALSDYDHLWLAPGNSGSGSLLQNKMLQSKELFETMARHPCFKDSPFVLILNKYDIFEEKVNRVPLSSCEWFNDFSPVNAHHNSQSLAHQAYFYIAMKFKDLYASLTSQKLFVWQGRARDRVTVDEAFKYTREVLKWDEEKEENYYGQPEDSFYSTTDISSSPYIRQE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0883 852 MobiDBLite consensus disorder prediction 833 852 - -
Lele49g0883 852 MobiDBLite consensus disorder prediction 830 852 - -
Lele49g0883 852 MobiDBLite consensus disorder prediction 54 138 - -
Lele49g0883 852 FunFam Extra-large guanine nucleotide-binding protein 3 464 616 - -
Lele49g0883 852 ProSiteProfiles G-alpha domain profile. 434 830 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 MobiDBLite consensus disorder prediction 89 138 - -
Lele49g0883 852 SMART galpha_1 424 797 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 Gene3D - 626 828 IPR027417 -
Lele49g0883 852 FunFam Extra-large guanine nucleotide-binding protein 3 630 828 - -
Lele49g0883 852 PRINTS Alpha G protein (transducin) signature 605 627 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 PRINTS Alpha G protein (transducin) signature 731 740 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 PRINTS Alpha G protein (transducin) signature 437 452 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 PRINTS Alpha G protein (transducin) signature 678 706 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 Gene3D - 464 616 IPR011025 GO:0007165
Lele49g0883 852 SUPERFAMILY Transducin (alpha subunit), insertion domain 463 615 IPR011025 GO:0007165
Lele49g0883 852 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 211 823 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 SUPERFAMILY FYVE/PHD zinc finger 149 224 IPR011011 -
Lele49g0883 852 CDD G-alpha 446 822 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 Pfam G-protein alpha subunit 431 818 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele49g0883 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 822 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0883 Lele-ChrLele49 5457661 5461909 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0883 49 5457661 5461909 Lele49g0883 49 5457661 5461909 ECH
Lele49g0883 49 5457661 5461909 Lele51g0900 51 5536874 5541302 hybridization
Lele49g0883 49 5457661 5461909 Lele52g0906 52 5863484 5868470 hybridization