Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0924 ATGAAGAAGATGCTTCCTCCTGGAGCTTCTCTGCCAGATGATGCTTCTGATCTTGACTACTCCATAGCCATAGAATATCAGGGTCCACCAGTTTCATATGAAGTACCAAGAGTTGATCCTCTTAATATGAAATCTCGAAGAGTTTCACGTTCTGAATCACAACAATCCATTTCTCGTGGGAGGCCTCCAGTAATTGAACCAATTCCTCTGCCAGTGTCTCGTATTGCTGGTGTAACAGGTTCTCCAAATCAAAGTCCTGGGATATCAGGAAGTTCAGAATCTCTAGTGTCTGTCTTGCAAAATCCTGACTCTTCTTCTGCTTCGGCTTCAGCATCGCCTGGTTCGGCTCATAATCCTCCTAGGCAAGAGGTTAATGAACCAAGGAGGGCATCTGTTGTCACTTTTAATACTGTTGATAGATCTCAAATGAAGGAAGCTGAAATTATGAAGCCAGTTTATCCAGAATATGTTGGGGTTTCAAAGGAAAGGAAAAAAAAGAAATTCAGAGTTTGTTATAGATGTGGAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAGTATTGTAGAAATTGTGTGCTCAGGGCCATGGGATCAATGCCTGAAGGACGCAAATGCGTAACTTGCATCGGCCAGCCTATAGATGAACTGAAGCGCATGAAATTAGGTAAACATTTAAGAGTATTATCTCGACTTCTTATTCCTCTAGAAGTTAAGCAAATTATGAGAGCAGAGAAGGAATGCTCTGCTAATCAGCTTCGGCCGGAGCAGCTGATGGTTAATGGATTCCCGCTGAAGCCTGAAGAGATGGCAGAATTACTTGGGTGCCCCTTACCTCCACGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAAAATCATAAGTTCAAACTTAAACTTCACTGGGAAACTTTGTGCTGATGCTAGTAATGGAAACACAAAAGTTTACATCAATGGTCGAGAGATTACAAAGCTTGAATTGAGGATACTAAAGCTGGCAAATGTACAGTGTCCACGTGATACCCACTTTTGGGTTTATGAGGATGGTCGTTATGAGGAAGAAGGTCAGAATAATATCAGAGGAAAAATTTGGGATAAGGCTTCAACAAGATTTGTTTGTACTCTGTTCTCTTTACCCTTTCCCAATGGAAAGCCTCATGTGCCAAGAGATAAGATTAGCAATTTTTCTACTGTTCCAGAATATCTGGAACAGAAAAAGGTTCAGAAACTTCTTCTTCTTGGACTTCAAGGATCAGGAACTAGCACTATCTTTAAGCAGGCCAAATTCTTGTATGGGAGCAGATTTACCGAAGAAGAGCTAGAGGATATCAAACTGATGATACAGAGTAACATGTACAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGCTTTGAGGAGGAGGATCGTTCTGAAATGAGTGCGCAAAGTTCTTCTCGTCAAACTATGGGACAAGTTGGGAAAAGTGAATCAAATGAAACTAGTCTATGCATCTATTCACTCAACCCGAGGCTGAAGCATTTCTCTGATTGGCTCCTGGATATTATAGCTACTGGGGATTTAGATGCATTCTTCCCAGCAGCCACACGTGAGTATGCACCATTAGTTGAAGAAGTGTGGAAGGATCCAGCAATACAAGAAACCTATAAAAGAAAAGACGAGCTTCACTTTCTTCCAGATGTGACAGAATATTTCTTAAGCCGGGCCATTGAGATATCCAGCAATGAATACGAACCATCTGAAAGAGACATCATATATGCAGAAGGGGTTACTCAGGGGAATGGTTTAGCTTGCATAGAATTCTCACTTGACGATCGTAGCCCAATGTCTGAGGTTTACACGGAAAATATGGACACTCAGCCACCACCTCTGACCAAGTACCAACTAATAAGAGTAAATGCCAAGGGGATGAATGAAGGTTGTAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCTGTGGTCTTCTGCCTCGCGCTGAGCGACTATGACCAGTTGTGGCTTGCCCCAGAAGGCAGTGGCAGTGGAAGCCTTCTGCAAAACAAGATGCTACAGAGCAAGGAACTATTTGAGACAATGGTGAGGCACCCTTGCTTCAAAGACTGTCCTTTTGTATTGATTCTGAACAAACATGATATCTTTGAGGAAAAGGTCAATAGGGTTCCTCTATCTGCCTGTGAGTGGTTCAATGACTTTTGTCCTGTGAGTGCTCATCGCAATAGCCAGTCACTGGCACATCAGGCTTACTTCTACATTGCCATGAAATTCAAAGACCTTTACGCTTCCCTCACCGACAGGAAACTTTTCGTGTGGCAAGGCCGGGCAAGGGACCGTGTGACCATCGACGAGGCCTTCAAGTACATAAGGGAGGTCCTCAAGTGGGATGAGGAAAAAGAGGAGAATTACTATGGCCAACCTGAAGATTCATTTTACAGTACTACAGACATAAGCTCCTCTCCTTATATCGGACAAGAGTAA 2529 0.429 MKKMLPPGASLPDDASDLDYSIAIEYQGPPVSYEVPRVDPLNMKSRRVSRSESQQSISRGRPPVIEPIPLPVSRIAGVTGSPNQSPGISGSSESLVSVLQNPDSSSASASASPGSAHNPPRQEVNEPRRASVVTFNTVDRSQMKEAEIMKPVYPEYVGVSKERKKKKFRVCYRCGKGKWETKESCLVCDAKYCRNCVLRAMGSMPEGRKCVTCIGQPIDELKRMKLGKHLRVLSRLLIPLEVKQIMRAEKECSANQLRPEQLMVNGFPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDKIISSNLNFTGKLCADASNGNTKVYINGREITKLELRILKLANVQCPRDTHFWVYEDGRYEEEGQNNIRGKIWDKASTRFVCTLFSLPFPNGKPHVPRDKISNFSTVPEYLEQKKVQKLLLLGLQGSGTSTIFKQAKFLYGSRFTEEELEDIKLMIQSNMYKYLSILLDGRERFEEEDRSEMSAQSSSRQTMGQVGKSESNETSLCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPDVTEYFLSRAIEISSNEYEPSERDIIYAEGVTQGNGLACIEFSLDDRSPMSEVYTENMDTQPPPLTKYQLIRVNAKGMNEGCKWVEMFEDVRAVVFCLALSDYDQLWLAPEGSGSGSLLQNKMLQSKELFETMVRHPCFKDCPFVLILNKHDIFEEKVNRVPLSACEWFNDFCPVSAHRNSQSLAHQAYFYIAMKFKDLYASLTDRKLFVWQGRARDRVTIDEAFKYIREVLKWDEEKEENYYGQPEDSFYSTTDISSSPYIGQE 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0924 842 FunFam Extra-large guanine nucleotide-binding protein 3 620 818 - -
Lele50g0924 842 SUPERFAMILY Transducin (alpha subunit), insertion domain 453 605 IPR011025 GO:0007165
Lele50g0924 842 MobiDBLite consensus disorder prediction 29 129 - -
Lele50g0924 842 ProSiteProfiles G-alpha domain profile. 424 820 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 FunFam Extra-large guanine nucleotide-binding protein 3 454 606 - -
Lele50g0924 842 PRINTS Alpha G protein (transducin) signature 595 617 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 PRINTS Alpha G protein (transducin) signature 721 730 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 PRINTS Alpha G protein (transducin) signature 427 442 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 PRINTS Alpha G protein (transducin) signature 668 696 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 201 813 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 MobiDBLite consensus disorder prediction 486 507 - -
Lele50g0924 842 CDD G-alpha 439 812 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 Pfam G-protein alpha subunit 422 808 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 Gene3D - 615 818 IPR027417 -
Lele50g0924 842 MobiDBLite consensus disorder prediction 823 842 - -
Lele50g0924 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 815 IPR027417 -
Lele50g0924 842 MobiDBLite consensus disorder prediction 493 507 - -
Lele50g0924 842 MobiDBLite consensus disorder prediction 818 842 - -
Lele50g0924 842 MobiDBLite consensus disorder prediction 77 119 - -
Lele50g0924 842 SMART galpha_1 407 809 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lele50g0924 842 Gene3D - 454 606 IPR011025 GO:0007165
Lele50g0924 842 SUPERFAMILY FYVE/PHD zinc finger 141 214 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0924 Lele-ChrLele50 5823220 5827828 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0924 50 5823220 5827828 Lele50g0924 50 5823220 5827828 ECH
Lele50g0924 50 5823220 5827828 Lele51g0900 51 5536874 5541302 hybridization
Lele50g0924 50 5823220 5827828 Lele52g0906 52 5863484 5868470 hybridization