Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0895 ATGCGCTCCCACGATCCCAACCCATTTGACGAAGAAGAAGTCAATCCCTTCTCGAATGGTGCTGGTGCCCCTGGTTCAAAGTTACGTGTTCCTCCCGTGGTATCTGAGCCACTTGGCTTTGGTCAACGTCATGATGCTACAGTGGATATTCCATTAGAGAATACACATGTCTCTAAGAAAAGGGAACAAGAGCTTGCAACTTGGGAAGCACATCTAAGAAGGAGAGAGCAGGACATCAAAAGAAGAGAAGATGCAGTTGCCAGATCTGGGGTTGTTGTTGACGATAAGAACTGGCCTCCATTTTTCCCAATCATTCACCATGACATAGCCAATGAGATACCTGCTCATGCCCAGAGGCTGCAATATTTGGCATTTGCAGGTTGGTTAGGGATTGTTCTCTGTCTGACTTTTAATGTAGTTGCTGTGATTGTCTGTTGGATTAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTAATTTATGCTCTACTTGGCGTCCCCCTTTCATATGTACTTTGGTACAGGCCCCTTTACCGTGCTATGAGGACAGATAGTGCATTTAAGTTTGGTTGGTTTTTCCTGTTTTACATGCTGCATATTGCTTTTTGTGTCATTGCTGCGATTGCACCTCCAATTGTCTTTCATGGAAAGTCATTAACGGGCATTCTTGCAGCAGTTGATGTCTTCTCAGACCATGTGCTAGTTGGAATTTTCTATTTGGTTGGATTTGCCTTGTTTTGCTTGGAGACTCTTCTAAGCTTGTGGGTGCTTCAGAAAATTTACATGTATTTCAGGGGAAACAAGTGA 807 0.4374 MRSHDPNPFDEEEVNPFSNGAGAPGSKLRVPPVVSEPLGFGQRHDATVDIPLENTHVSKKREQELATWEAHLRRREQDIKRREDAVARSGVVVDDKNWPPFFPIIHHDIANEIPAHAQRLQYLAFAGWLGIVLCLTFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSAFKFGWFFLFYMLHIAFCVIAAIAPPIVFHGKSLTGILAAVDVFSDHVLVGIFYLVGFALFCLETLLSLWVLQKIYMYFRGNK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0895 268 Pfam SCAMP family 96 266 IPR007273 GO:0015031|GO:0016020
Lele52g0895 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 267 IPR007273 GO:0015031|GO:0016020
Lele52g0895 268 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0895 Lele-ChrLele52 5802915 5807994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0895 2 268 Miscellaneous Gene Families AT1G32050 72.491 6.86e-149 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0895 52 5802915 5807994 Lele52g0895 52 5802915 5807994 ECH
Lele49g0878 49 5419106 5430700 Lele52g0895 52 5802915 5807994 hybridization
Lele50g0916 50 5767341 5771597 Lele52g0895 52 5802915 5807994 hybridization