Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0916 ATGCGCTCCCACGATCCCAACCCATTTGACGAAGAAGAGTTACGTGTTCCTCCCGTGGCATCTGAGCCACTTGGCTTTGGTCAACGTCAGGATGCTACAGTGGATATTCCATTAGAGAATACAAATATCTCTAAGAAAAGGGAAAAAGAGCTTGCAACTTGGGAAGCAGATCTAAAAAGGAGAGAGCAGGACATCAAAAGAAGAGAAGATGCGGTTGCCAGATCTGGGGTTGTTGTTGACGATAAGAACTGGCCTCCATTTTTCCCAATCATTCACCATGACATAGCCAATGAGATACCTGCTCATGCCCAGAGGCTGCAATATTTGGCATTTGCAAGTTGGTTAGGGATTGTTCTCTGTCTGGCTTTTAATGTAGTTGCTGTGATTGCCTGTTGGATTAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTAATTTATGCTCTACTTGGAGTCCCCCTTTCATATGTACTTTGGTACAGGCCCCTTTACCGTGCTATGAGGACAGATAGTGCATTTAAGTTTGGTTGGTTTTTCCTGTTTTACATGCTTCATATTGCTTTTTGTGTCATTGCTGCGATTGCACCTCCAATTGTCTTTCATGGAAAGTCATTGACGGGCATTCTTGCAGCAATTGATGTCTTCTCAGACCATGTGCTAGTTGGAATTTTCTATTTGGTTGGATTTGCCTTGTTTTGCTTGGAGACTCTTCTAAGCTTGTGGGTGCTTCAGAAAATTTACATGTATTTCAGGGGGAACAAGTGA 765 0.4314 MRSHDPNPFDEEELRVPPVASEPLGFGQRQDATVDIPLENTNISKKREKELATWEADLKRREQDIKRREDAVARSGVVVDDKNWPPFFPIIHHDIANEIPAHAQRLQYLAFASWLGIVLCLAFNVVAVIACWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSAFKFGWFFLFYMLHIAFCVIAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFALFCLETLLSLWVLQKIYMYFRGNK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0916 254 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 253 IPR007273 GO:0015031|GO:0016020
Lele50g0916 254 Pfam SCAMP family 82 252 IPR007273 GO:0015031|GO:0016020
Lele50g0916 254 MobiDBLite consensus disorder prediction 1 22 - -
Lele50g0916 254 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0916 Lele-ChrLele50 5767341 5771597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0916 2 254 Miscellaneous Gene Families AT1G32050 72.137 4.29e-146 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0916 50 5767341 5771597 Lele50g0916 50 5767341 5771597 ECH
Lele50g0916 50 5767341 5771597 Lele51g0895 51 5498046 5501743 hybridization
Lele50g0916 50 5767341 5771597 Lele52g0895 52 5802915 5807994 hybridization