Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0861 ATGATGAACCGCGGTGTTATTATCACCGGCAGAGTCGCCGTCGCGGCCGGCTCACGTTTCTTCTCTTCTACTACCGGTTCAACCGCCCGTGCTGTCGCCAGTGAGGAGGTGTTGAGTAATGTCGCCAAGGGTTTTGGGGATCAGGTTGCGAATCGGGGTTACTGGCTGAGGGTTCCATTGATACACGGTGGAAATCTCCGGTATTCGAGCACTCTCTCGGTGGAAGAGAAAGAGAAGCAGGATGTGCCGGCTACTGCATCAACCGATAGCAGTGCGAGCGGGAACAAAGACGGGAAGGTGACGGAGAGTTACTGGGGTGTTGCTCCCTCGAGGATCACGAAGCCGGACGGTACGGAATGGAAGTGGAATTGTTTTAGGCCATGGGAGACATACAAAGCGGACTTGTCGATTGATCTGAACAAGCACCATGCGCCGGAGACATTTATGGACAAGATGGCTTATTGGACCGTCAAGACTCTCAGATGGCCCACTGATATATTCTTCCAGAGACGATACGGATGCCGAGCAATGATGCTGGAGACAGTGGCGGCTGTACCGGGCATGGTAGGAGGGATGCTCCTGCACTTGAAGTCGCTGAGACGGTTCGAGCACAGTGGGGGTTGGATCAAGGCACTGATGGAAGAAGCAGAGAACGAGCGTATGCACTTAATGACGTTCATGGAGGTTTCAAAGCCCAGGTGGTACGAGCGAGCCCTGGTCATAGCCGTCCAAGGTGTCTTCTTCAATGCTTACTTCTTGGGCTATTTGATGTCCCCTAAATTCGCACACCGCATGGTGGGGTACCTTGAGGAGGAGGCCATTCACTCCTACACTGAATTCCTCAAGGAATTGGACAAAGGCACCATCGAGAATGTTCCAGCACCAGCCATTGCAATCGACTATTGGCAGCTTCCATCTGACGCCACTTTGAGAGATGTGGTCATGGTCGTTAGAGCTGATGAAGCCCACCACCGTGATGTCAACCACTTTGCATCCGACATTCATTATCAAGGGCGAGAGCTGAGGGAAGCGCCGGCTCCTGTTGGTTATCACTAG 1056 0.5312 MMNRGVIITGRVAVAAGSRFFSSTTGSTARAVASEEVLSNVAKGFGDQVANRGYWLRVPLIHGGNLRYSSTLSVEEKEKQDVPATASTDSSASGNKDGKVTESYWGVAPSRITKPDGTEWKWNCFRPWETYKADLSIDLNKHHAPETFMDKMAYWTVKTLRWPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRRFEHSGGWIKALMEEAENERMHLMTFMEVSKPRWYERALVIAVQGVFFNAYFLGYLMSPKFAHRMVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDYWQLPSDATLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAPAPVGYH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0861 351 Pfam Alternative oxidase 141 331 IPR002680 GO:0009916
Lele52g0861 351 MobiDBLite consensus disorder prediction 78 98 - -
Lele52g0861 351 MobiDBLite consensus disorder prediction 84 98 - -
Lele52g0861 351 PANTHER ALTERNATIVE OXIDASE 14 351 IPR002680 GO:0009916
Lele52g0861 351 Gene3D Alternative oxidase 106 349 IPR038659 -
Lele52g0861 351 CDD AOX 168 335 IPR002680 GO:0009916
Lele52g0861 351 FunFam Ubiquinol oxidase 104 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0861 Lele-ChrLele52 5575061 5578431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0861 1 351 Miscellaneous Gene Families AT3G22370 70.637 0.0 524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0861 52 5575061 5578431 Lele52g0861 52 5575061 5578431 ECH
Lele49g0843 49 5224598 5224897 Lele52g0861 52 5575061 5578431 hybridization
Lele50g0879 50 5538747 5541453 Lele52g0861 52 5575061 5578431 hybridization