Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0843 ATGCACTTAATGACGTTCATGGAGGTTTCAAAGCCCAAGTGGTACGAGCGAGCACTGGTCATAGCCGTCCAAGGTGTATTCTTCAATGCTTACTTCTTGAGCTATTTGCTGTCCCCTAAATTCGCACACCGCACGGTTGGGTACCTTGAGGAGGAGGCCATTCACTCCTACACTGAGTTCCTCAAGGAGTTGGACAAAGGCACCATCGAGGATGTTCCAGCACCTGCCACTGCCATCGACTATTGGCAGCTTCCGGCTGATGCCACTTTGAGAGACGTCATCATGGTGATTAGAGCTTGA 300 0.5067 MHLMTFMEVSKPKWYERALVIAVQGVFFNAYFLSYLLSPKFAHRTVGYLEEEAIHSYTEFLKELDKGTIEDVPAPATAIDYWQLPADATLRDVIMVIRA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0843 99 Pfam Alternative oxidase 1 99 IPR002680 GO:0009916
Lele49g0843 99 Gene3D Alternative oxidase 1 99 IPR038659 -
Lele49g0843 99 PANTHER ALTERNATIVE OXIDASE 1 99 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0843 Lele-ChrLele49 5224598 5224897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0843 1 99 Miscellaneous Gene Families AT3G22370 88.889 4.64e-62 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0843 49 5224598 5224897 Lele49g0843 49 5224598 5224897 ECH
Lele49g0843 49 5224598 5224897 Lele51g0861 51 5289787 5291790 hybridization
Lele49g0843 49 5224598 5224897 Lele52g0861 52 5575061 5578431 hybridization