Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0879 ATGATGAACCGCGGTGTTATTATCACCGGCAGAGTCGCCGTCGCGGCCGGCTCACGTTTCTTCTCTTCTACTACCGCTTCAACCGCCCGTGCTGTCGCCAAGGGTTTTGGCGATCAGGTTGCGAATCGGGGATACTGGCTGAGGGTTCCATTGATACAGGGTGGACATGTCAGGTATTCGAGCACTTTGTCGGTGGAAGAGAAAGAGAAGCAGGATGTGCCGGCTACTGCTTCAACAGATAGCAGTGCGAGTGGGAACAAAGACGCGAAGGTGACGGAGAGTTACTGGGGTGTTGCTCCCTCAAGGATCACGAAGCCGGACGGTACGGAATGGAAGTGGAATTGTTTTAGGCCATGGGAGACATACAAAGCGGACTTGTCGATTGATCTGAACAAGCACCATGCGCCGGAGACATTTATGGACAAGATGGCTTATTGGACCGTCAAGACTCTCAGATGGCCCACTGATATATTCTTCCAGAGACGGTACGGATGCCGAGCAATGATGCTGGAGACAGTGGCGGCTGTACCGGGCATGGTAGGAGGGATGCTCCTGCACCTGAAGTCGCTGAGACGGTTCGAGCACAGTGGGGGTTGGATAAAGGCACTGATGGAAGAAGCAGAGAACGAGCGTATGCACTTAATGACGTTCATGGAGGTTTCAAAGCCCAGGTGGTACGAGCGGGCTCTGGTCATAGCCGTCCAAGGTGTCTTCTTCAACGCTTACTTCTTGGGCTATTTGATGTCCCCTAAATTCGCACACCGCATGGTGGGGTACCTTGAGGAGGAGGCCATTCACTCCTACACGGAATTCCTCAAGGAATTGGACAAAGGCACCATCGAGAATGTTCCAGCACCAGCCATTGCAATCGACTATTGGCAGCTTCCATCTGACGCCACTTTGAGAGATGTGGTCATGGTCGTTAGAGCTGATGAAGCCCACCACCGTGATGTCAACCACTTTGCATCCGACATTCATTATCAAGGGCGAGAGCTGAGGGAAGCGCCTGCTCCTATTGGTTATCACTAG 1029 0.5287 MMNRGVIITGRVAVAAGSRFFSSTTASTARAVAKGFGDQVANRGYWLRVPLIQGGHVRYSSTLSVEEKEKQDVPATASTDSSASGNKDAKVTESYWGVAPSRITKPDGTEWKWNCFRPWETYKADLSIDLNKHHAPETFMDKMAYWTVKTLRWPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRRFEHSGGWIKALMEEAENERMHLMTFMEVSKPRWYERALVIAVQGVFFNAYFLGYLMSPKFAHRMVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDYWQLPSDATLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAPAPIGYH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0879 342 Gene3D Alternative oxidase 97 339 IPR038659 -
Lele50g0879 342 MobiDBLite consensus disorder prediction 68 87 - -
Lele50g0879 342 Pfam Alternative oxidase 132 322 IPR002680 GO:0009916
Lele50g0879 342 FunFam Ubiquinol oxidase 95 339 - -
Lele50g0879 342 CDD AOX 159 326 IPR002680 GO:0009916
Lele50g0879 342 PANTHER ALTERNATIVE OXIDASE 13 342 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0879 Lele-ChrLele50 5538747 5541453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0879 1 342 Miscellaneous Gene Families AT3G22370 70.986 0.0 519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0879 50 5538747 5541453 Lele50g0879 50 5538747 5541453 ECH
Lele50g0879 50 5538747 5541453 Lele51g0861 51 5289787 5291790 hybridization
Lele50g0879 50 5538747 5541453 Lele52g0861 52 5575061 5578431 hybridization