Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0840 ATGGGCTCCCAGGGTGGGTTCGGGCAATCCAAGGAGTTCCTTGATCTGGTAAAGTCCATTGGTGAAGCTCGGTCCAAGGCCGAGGAAGACCGAATCGTCCTCAATGAGATCGAAACCCTCAAGCGTCGTATAATTGAACCTGACATTCCCAAGCGCAAGATGAAGGAATACATCATTCGCCTTGTTTATGTGGAGATGTTGGGTCACGATGCCTCTTTTGGTTACATCCATGCCGTTAAGATGACCCATGACGACAACATCCTCCTTAAACGAACTGGATATTTGGCTGTGACCATTTTTCTGAATGAAGATCACGATTTGATCATCCTCATTGTCAATACCATTCAGAAGGACCTCAAGTCCGACAATTATTTAGTTGTCTGTGCTGCCCTTAATGCCGTCTGTAGGCTGATTAATGAAGAGACTATTCCAGCTGTACTGCCTCAGGTGATTGAGCTTCTGGGTCATTCCAAGGAGGCCGTTCGGAAGAAGGCTATCATGTCTCTTCATCGTTTCTATCAGAAGTCACCTTCTTCAGTGTCACACTTGATCTCCAATTTCCGCAAGAGATTGTGTGATAACGATCCTGGGGTAATGGGTGCCACGTTATGTCCTCTATTTGACCTCATCACGAATGATGTCAATTCTTACAAAGATCTCGTCATCAGCTTTGTGAGCATTCTCAAACAAGTAGCAGAACGCAGATTGCCAAAGAACTATGACTATCATCAGATGCCCGCTCCATTCATTCAGATTAAATTGCTGAAAATCTTGGCATTGTTAGGGAGTGGTGACAGGCAAGCCAGTGAAAACATGTATACTGTTATTAGTGATATAATCAGGAAGGGCGATTCATCAAGTAATATAGGGAATGCTATTCTATATGAGTGCATATGCTGTGCCGCTTCTATATATCCCAATCCTAAGCTAATAGAAGCTGCTGCAGATGTCGTTGCAAAATTTTTGAAGAGTGACACTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGCTAATAAAGTTAAGCCCGCAAATTGCAGAACAACACCAACTGGCCGTGATTGACTGCTTAGAGGACCCTGATGATACTCTGAAGCGGAAAACATTCGAATTGCTATACAAGATGACCAAGTCCTCTAATGTGGAAGTGATTGTTGACCGTATGATTGAATACATGATTAGTATTAGTGATGATCATTATAAAACCTATATAGCATCTCGGTGTGTGGAACTTGCTGAGCAATTTGCACCCAGTAATCATTGGTTTATACAGACTATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATGTCAAGGTAGCACATAATTTGATGCGGTTGATTGCAGAAGGATTTGGAGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCAGCTGTGGAGTCATATTTGCGTATTATTGGAGAGCCAAAGCTGCCATCTGTGTTTCTTCAAGTCATTTGTTGGGTTCTTGGGGAATATGGCACAGCAGATGGAAAGCATAGTGCTTCCTATATCACTGGGAAGTTATGTGATGTGGCAGAGTCATATTCTGATGATGTAACTGTTAAGGAATATGCAACTTCAGCACTAATGAAAATTTATGCATTTGAAGTAGCAGCTGGAAGGAAAGTGGATTTGCTACCTGAGTGTCAAACGTTGATTGAAGAAATGTTAGCATCCCACTCTACAGATTTGCAGCAGCGAGCCTATGAATTGCAAGCTCTTATTGGGTTGGACAGACAAGCTGTCGAGGCTATAATGCCACAGGACGCAAGTTGTGAAGATATTGAGGTTAATAAGAACCTTTCATTCCTCAATGATTACGTCCAACAGTCCATAGAAAGGGGTGCTCAGCCTTACATTCCTGAGGATGTGCGTGCTGGAATGGAGGATATGAGCAACTTCAGAGGCCAAGATAAGCATGAACCTTCACATCATGGACTGAGATTTGAGGCATATGAACTTCCAAAGGTTCCACCGCCTTCAAAAGATGCTCCTGTTTCAATTGCATCCTCAACAGACCTAGTTCCAGTACCTGAGGCACTGTATTCTAGGGAGTCCGATCAGATCTCGTCAGCGGCATCAGCATCAGAAGCTGGATCATCAGGACTCAAGCTTCGGCTTGATGGTGTTCAAAGGAAATGGGGCAGGCCAACGTATTCATCTCCAGCTCCGTCTAATGCTTCAGAATCTTCTTCCCAAAAACCAGTGTACGGGATGACCCAGGTGAATGGTGCAAGTGCAGTAAATTCAAAAGTACGGGATAGTTATGATTCAAGGAAGACACCAGTTGAAATTTCTCCAGAAAAACAGAAACTTGCTGGTTTATTGTTTGGTGGTTCTAGTAAGCCTGAGAGAAAGTCATCAGCTGGCCATAAGGCTCCAAAGGCAAATGCCAGTGCAGCAGACAGATCTCAGGAATCAAAGATTGCAGTTGCCTCCAATGAAGCAGCTGGAGAGAAAACAAGTCAACAACCTCCTCCAGATTTGCTGGACTTGGGGGAACCAACTGTCACAACTGCTCCTCATTCTGTGGTGGACCCATTCAAGGAGCTGGAAGGACTTCTTGACGCAAGCCCTGATTCCACATTAGATCACAGTGCAGGTACCACTGCAAAAGTTCCTGATATTATGACACTTTATGGAGGGACAAGCACTGGCGAGCAGAGTGCAAGTGGTGGCTATTCTATCCCTGTTAGTGGAGAGGGAAATCTTTTATCTGGCTTGTCAAATGCACCTGCGACTGTTACATCTTCATCCCAATCTGTGAAGGGTCCAAACGCTAAAGATTCATTGGAGAAGGATGCGCTAGTGAGGCAGTTGGGTGTGAACCCATCAAGTCAAAATCCAAACTTATTCAAAGACTTGCTTGGCTAA 2892 0.4402 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRIIEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNILLKRTGYLAVTIFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVIELLGHSKEAVRKKAIMSLHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITNDVNSYKDLVISFVSILKQVAERRLPKNYDYHQMPAPFIQIKLLKILALLGSGDRQASENMYTVISDIIRKGDSSSNIGNAILYECICCAASIYPNPKLIEAAADVVAKFLKSDTHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKHSASYITGKLCDVAESYSDDVTVKEYATSALMKIYAFEVAAGRKVDLLPECQTLIEEMLASHSTDLQQRAYELQALIGLDRQAVEAIMPQDASCEDIEVNKNLSFLNDYVQQSIERGAQPYIPEDVRAGMEDMSNFRGQDKHEPSHHGLRFEAYELPKVPPPSKDAPVSIASSTDLVPVPEALYSRESDQISSAASASEAGSSGLKLRLDGVQRKWGRPTYSSPAPSNASESSSQKPVYGMTQVNGASAVNSKVRDSYDSRKTPVEISPEKQKLAGLLFGGSSKPERKSSAGHKAPKANASAADRSQESKIAVASNEAAGEKTSQQPPPDLLDLGEPTVTTAPHSVVDPFKELEGLLDASPDSTLDHSAGTTAKVPDIMTLYGGTSTGEQSASGGYSIPVSGEGNLLSGLSNAPATVTSSSQSVKGPNAKDSLEKDALVRQLGVNPSSQNPNLFKDLLG 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0840 963 MobiDBLite consensus disorder prediction 806 827 - -
Lele52g0840 963 MobiDBLite consensus disorder prediction 916 932 - -
Lele52g0840 963 MobiDBLite consensus disorder prediction 720 837 - -
Lele52g0840 963 PIRSF AP4_epsilon 919 963 IPR017109 GO:0015031|GO:0030124
Lele52g0840 963 PIRSF AP4_epsilon 685 832 IPR017109 GO:0015031|GO:0030124
Lele52g0840 963 PIRSF AP4_epsilon 1 669 IPR017109 GO:0015031|GO:0030124
Lele52g0840 963 MobiDBLite consensus disorder prediction 916 938 - -
Lele52g0840 963 SUPERFAMILY ARM repeat 27 625 IPR016024 -
Lele52g0840 963 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 15 819 - -
Lele52g0840 963 Pfam Adaptin N terminal region 49 582 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lele52g0840 963 MobiDBLite consensus disorder prediction 724 758 - -
Lele52g0840 963 Gene3D - 3 594 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0840 Lele-ChrLele52 5388846 5395656 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0840 52 5388846 5395656 Lele52g0840 52 5388846 5395656 ECH
Lele49g0816 49 5002198 5010113 Lele52g0840 52 5388846 5395656 hybridization
Lele50g0853 50 5327034 5333856 Lele52g0840 52 5388846 5395656 hybridization