Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0816 ATGGGCTCCCAAGGTGGGTTCGGGCAATCCAAGGAGTTCCTTGATCTGGTTAAGTCCATTGGTGAAGCTCGATCCAAGGCCGAGGAAGACCGAATCGTCCTCAATGAGATCGAAACCCTCAAGCGTCGTATAATTGAACCAGACATTCCCAAGCGCAAGATGAAGGAATACATCATTCGCCTTGTTTATGTCGAGATGTTGGGTCACGATGCCTCTTTTGGTTACATCCATGCCGTTAAGATGACCCACGACGACAATATCCTCCTTAAACGAACTGGGTATTTGGCTGTGACCCTTTTTCTGAATGAAGATCACGATTTGATCATCCTCATTGTCAATACCATTCAGAAGGACCTCAAGTCTGACAATTATTTAGTTGTCTGTGCTGCCCTTAATGCCGTCTGTAGGCTGATTAATGAAGAGACTATTCCGGCTGTACTGCCTCAAGTGATTGAGCTTTTGGGTCATTCCAAGGAGGCCGTTCGGAAGAAGGCCATCATGGCTCTTCATCGCTTCTATCAGAAGTCACCTTCTTCAGTGTCACACTTGATCTCCAATTTCCGCAAGAGATTGTGTGATAATGATCCTGGTGTAATGGGTGCCACGTTATGCCCTCTATTTGACCTCATCATGAATGATGTCAATTCTTTCAAAGATCTCGTCATCAGCTTTGTGAGCATTCTCAAACAAGTAGCAGAACGCAGATTGCCAAAGAGCTATGACTATCATCAGATACCCGCTCCATTCATTCAGATTAAATTGCTGAAAATATTGGCATTGTTAGGGAGTGGTGACAAGCAAGCCAGTGAAAACATGTATACTGTTATTAGTGATATAACCAGGAAGGGCGATTCATCAAGTAATATAGGGAACGCTATTCTATATGAGTGCATATGCTGTGCCGCTTCTATATATCCCAATCCTAAGCTAATAGAAGCTGCTGCAGATGTTGTTGCAAAATTTTTAAAGAGTGACGTTCATAATCTCAAGTACATGGGCATTGATGCTCTTGGTCGGCTAATAAAGTTAAGCCCACAAATTGCAGAACAACACCAACTGGCCGTGATTGACTGCTTAGAGGACCCTGATGATACTTTGAAGCGGAAAACGTTTGAATTGCTATACAAGATGACCAAGTCCTCTAATGTGGAAGTTATTGTTGACCGTATGATTGAATACATGATTAGTATTAGTGATGATCATTATAAAACCTATATAGCATCTCGTTGTGTGGAACTTGCTGAGCAATTTGCACCCAGTAATCATTGGTTTATGCAGACTATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTAAATGTCAAGGTAGCACATAATTTGATGCGGTTGATTGCAGAAGGATTTGGAGAGGATGATGATGCGGCAGATAGTCAGTTGAGATCATCAGCTGTGGAGTCATATTTGCATATTGTTGGAGAGCCAAAGCTGCCATCTGTGTTTCTTCAAGTCATTTGTTGGGTTCTTGGGGAATATGGCACAGCAGACGGAAAGCATAGTGCATCCTATATTACTGGGAAGTTATGTGATGTGGCAGAGGCATATTCTGACGATTTAACTGTTAAGGCATATGCAACTTCAGCACTAACGAAAATTTACGCATTTGAAGTAGCTGCTGGAAGGAAAGTGGATTTGCTACCTGAGTGTCAAACGTTGATTGAAGAAATGTTAGCATCCCACTCTACAGATTTGCAGCAGCGAGCCTATGAATTGCAAGCTCTTAATGGGTTGGACAGACAAGCTGTTGAGGCTATAATGCCACAAGACGCAAGTTGTGAAGATATTGAGGTTGATAAGAACCTTTCGTTCCTCAACGATTACGTCCAACAGTCCATAGAAAGGGGTGCTCAGCCTTACATTCCTGAGGATGTGCGCTCTGGAATGGATGATATGAGCAACTTCAGAGGCCAAGATAAGCATGAACCTTCACATCATGTACTGAGATTTGAGGCATATGAACTTCCAAAAGCTCCACCACCTTCAAAAGCTGCTCCTGTTTCAATTGCATCCTCAACAGACCTTGTTCCAGTACCTGAGGCACTGTATTCTAGGGAGTCCCACCAGATCTCATCAGCAGCATCAGCATCAGCATCAGAAGCAGGATCATCAGGACTTAAGCTTCGGCTTGATGGTGTTCAAAGGAAGTGGGGCAGGCCAACATATTCATCTCCAGCTCCATCTAATACTTCAGAATCTTCTTCCCAAAAACCAGTGAATGGGATGACCCAGGTGAATGGTGCAAGTGCAGTAAATTCAAAAGTGCGGGATAGTTATGATTCAAGGAAGACACCAGTTGAAATTTCTCCAGAAAAGCAGAAACTTGCTGGTTTATTGTTTGGTGGTTCAAGTAAGCCTGAGAGAAAATCATCAGCCGGCCATAAGACTCCAAAGGCAAATGCCAGTGCAGCAGACAGATCTCAGGAATCAAAGAGTGCAGTTGCCTCCGATGAAGCAGCTGGAGAGAAAACAAGTCATCAACCTCCTCCAGATTTGCTGGACTTGGGGGAACCAACTGTCACAACTGCTCCTCCTTCTGTGGTGGACCCATTCAAGCAGCTGGAAGGACTTCTTGATGCAAGCCCTGGTTCGACAATAGATCATAGTGCAGGTGCTACGGCAAAAGTTCCTGATATTATGACACTTTATGGAGGGACAACCACTGGCGAGCAGAGCGCAAGTGGTGGCTATTCTATCCCTGTTAGTGGAGAGGGAAATCTTTTATCTGGCTTGTCAAATGCACCTGCGACTGTGACATCATCTCCTCAATCTGTGAAGGGTCCAAATGCTAAAGATTCATTGGAGAAGGATGCGCTAGTGAGGCAGTCGGGTGTGAACCCATCAAGTCAAAATCCAAACTTGTTCAAAGACTTGCTTGGCTAA 2898 0.4396 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRIIEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNILLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVIELLGHSKEAVRKKAIMALHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLIMNDVNSFKDLVISFVSILKQVAERRLPKSYDYHQIPAPFIQIKLLKILALLGSGDKQASENMYTVISDITRKGDSSSNIGNAILYECICCAASIYPNPKLIEAAADVVAKFLKSDVHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFMQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLHIVGEPKLPSVFLQVICWVLGEYGTADGKHSASYITGKLCDVAEAYSDDLTVKAYATSALTKIYAFEVAAGRKVDLLPECQTLIEEMLASHSTDLQQRAYELQALNGLDRQAVEAIMPQDASCEDIEVDKNLSFLNDYVQQSIERGAQPYIPEDVRSGMDDMSNFRGQDKHEPSHHVLRFEAYELPKAPPPSKAAPVSIASSTDLVPVPEALYSRESHQISSAASASASEAGSSGLKLRLDGVQRKWGRPTYSSPAPSNTSESSSQKPVNGMTQVNGASAVNSKVRDSYDSRKTPVEISPEKQKLAGLLFGGSSKPERKSSAGHKTPKANASAADRSQESKSAVASDEAAGEKTSHQPPPDLLDLGEPTVTTAPPSVVDPFKQLEGLLDASPGSTIDHSAGATAKVPDIMTLYGGTTTGEQSASGGYSIPVSGEGNLLSGLSNAPATVTSSPQSVKGPNAKDSLEKDALVRQSGVNPSSQNPNLFKDLLG 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0816 965 MobiDBLite consensus disorder prediction 890 965 - -
Lele49g0816 965 MobiDBLite consensus disorder prediction 890 933 - -
Lele49g0816 965 MobiDBLite consensus disorder prediction 800 819 - -
Lele49g0816 965 Pfam Adaptin N terminal region 49 580 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lele49g0816 965 MobiDBLite consensus disorder prediction 947 965 - -
Lele49g0816 965 PIRSF AP4_epsilon 1 833 IPR017109 GO:0015031|GO:0030124
Lele49g0816 965 PIRSF AP4_epsilon 926 965 IPR017109 GO:0015031|GO:0030124
Lele49g0816 965 MobiDBLite consensus disorder prediction 726 760 - -
Lele49g0816 965 MobiDBLite consensus disorder prediction 722 852 - -
Lele49g0816 965 Gene3D - 3 594 IPR011989 -
Lele49g0816 965 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 15 803 - -
Lele49g0816 965 SUPERFAMILY ARM repeat 10 587 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0816 Lele-ChrLele49 5002198 5010113 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0816 49 5002198 5010113 Lele49g0816 49 5002198 5010113 ECH
Lele49g0816 49 5002198 5010113 Lele51g0839 51 5103402 5111009 hybridization
Lele49g0816 49 5002198 5010113 Lele52g0840 52 5388846 5395656 hybridization