Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0853 ATGGGCTCCCAGGGTGGGTTCGGGCAATCCAAGGAGTTCCTTGATCTGGTAAAGTCCATTGGTGAAGCTCGATCCAAGGCCGAGGAAGACCGAATCGTCCTCAATGAGATCGAAACCCTCAAGCGTCGTATAATTGAACCTGACATTCCCAAGCGCAAGATGAAGGAATACATCATTCGCCTTGTTTATGTGGAGATGTTGGGTCACGATGCCTCTTTTGGTTACATCCATGCCGTTAAGATGACCCATGACGACAACATCCTCCTTAAACGAACTGGGTATTTGGCTGTGACCCTTTTTCTGAATGAAGATCACGATTTGATCATCCTCATTGTCAATACCATTCAGAAGGACCTCAAGTCCGACAATTATTTAGTTGTCTGTGCTGCCCTTAATGCCGTCTGTAGGCTGATTAATGAAGAGACTATTCCAGCTGTACTGCCTCAGGTGATTGAGCTTCTGGGTCATTCCAAGGAGGCCGTTCGGAAGAAGGCTATCATGTCTCTTCATCGTTTCTATCAGAAGTCACCTTCTTCGGTGTCACACTTGATCTCCAATTTCCGCAAGAGATTGTGTGATAACGATCCTGGTGTAATGGGTGCTACGTTATGCCCTCTATTTGACCTCATCACGAATGATGTCAATTCTTACAAAGATCTCGTCATCAGCTTTGTGAGCATTCTCAAACAAGTAGCAGAACGCAGATTGCCAAAGAGCTATGACTATCATCAGATGCCCGCTCCATTCATTCAGATTAAATTGCTGAAAATCTTGGCATTGTTAGGGAGTGGTGACAAGCAAGCCAGTGAAAACATGTATACTGTTATTAGTGATATAATCAGGAAAGGCGATTCATCAAGTAATATAGGGAATGCTATTCTGTATGAGTGCATATGCTGTGCCGCTTCTATATATCCCAATCCTAAGCTAATAGAAGCTGCTGCGGATGTCGTTGCAAAATTTTTGAAGAGTGACACTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGCTAATAAAGTTAAGTCCGCAAATTGCAGAACAACACCAACTGGCCGTGATTGACTGCTTAGAGGATCCTGATGATACTCTGAAGCGGAAAACATTCGAATTGCTATACAAGATGACCAAGTCCTCTAATGTGGAAGTGATTGTTGACCGTATGATTGAATACATGATTAGTATTAGTGATGATCATTATAAAACCTATATAGCATCTCGGTGTGTGGAACTTGCTGAGCAATTTGCACCCAGTAATCATTGGTTTATACAGACTATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATGTCAAGGTAGCACATAATTTGATGCGGTTGATTGCAGAAGGATTTGGAGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCAGCTGTGGAGTCATATTTGCGTATTATTGGAGAGCCAAAGCTGCCATCTGTGTTTCTTCAAGTCATTTGTTGGGTTCTTGGGGAATATGGCACAGCAGATGGAAAGCATAGTGCATCCTATATCACTGGGAAGCTATGTGATGTGGCAGAGGCATATTCTGATGATGTAACTGTTAAGGAATATGCAACTTCTGCACTGATGAAAATTTATGCATTTGAAGTAGCAGCTGGAAGGAAAGTGGATTTGCTACCTGAGTGTCAAATGTTGATTGAAGAAATGTTAGCATCCCACTCTACAGATTTGCAGCAGCGAGCCTATGAATTGCAAGCTCTTATTGGGTTGGACAGACAAGCTGTCAAGGCTGTAATGCCACGGGACGCAAGTTGTGAAGATATTGAGGTTGATAAGAACCTTTCATTCCTCAATGATTACGTCCAACAGTCCATAGAAAGGGGTGCTCAGCCTTACATTCCTGAGGATGTGCGTGCTGGAATGGAGGATATGAGCAACTTCAGAGGCCAAGATAAGCATGAACCTTCACATCATGGACTGAGATTTGAGGCATATGAACTTCCAAAGGTTCCACCTCCTTCAAAAGATTCTCCTGTTTCAATTGCATCCTCAACAGACCTAGTTCCAGTACCTGAGGCACTGTATTCTAGGGAGTCCCATCAGATCTCATCAGCAGCATCAGCATCAGAAGCTGGATCATCAGGACTTAAGCTTCGGCTTGATGGTGTTCAAAGGAAGTGGGGCAGGCCAACATATTCATCTCCAGCTCCATCTAATGCTCCAGAATCTTCTTCCCAAAAACCAGTGAATGGGATGACCCAGGTGAATGGTGCAAGTGCAGTAAATTCAAATGTACGGGATAGTTATGATTCAAGGAAGACGCCAGTTGAAATTTCTCCACAAAAGCAGAAACTTGCTGGTTTATTGTTTGGTGGTTCTAGTAAGCATGAGAGAAAATCATCAGCTGGCCATAAGGCTCCAAAGGCAAATGCCAGTGCAGCAGACAGATCTCAGGAATCAAAGATTGCGGTTGCCTCCAATGAAGCAGCTGGAGAGAAAACAAGTCAACAACCTCCTCCAGATTTGCTGGACTTGGGGGAACCAACTGTCACAACTGCTCCTCATTCTGTGGTGGACCCATTCAAGCAGCTGGAAGGACTTCTTGATGCAAGCCCTGATTCGACATTAGATCACAGTGCAGGTACCACTGCAAAAGTTCCTGATATTATGGCACTTTATGGAGGGACAACCACTGGCGAGCAGAGTGCAAGTGGTGGCTATTCTATCCCTGTTAGTGGAGAGGGAAATCTTTTATCTGGCTTGTCAAATGCACCTGCGACTGTTACATCTTCATCTCAATCTGTGAAGGGTCCAAACGCTAAAGATTCATTGGAGAAGGATGCGCTAGTGAGGCAGTTGGGTGTGAACCCATCAAGTCAAAATCCAAACTTATTCAAAGACTTATTTGGCTAA 2892 0.4388 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRIIEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNILLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVIELLGHSKEAVRKKAIMSLHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLITNDVNSYKDLVISFVSILKQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKQASENMYTVISDIIRKGDSSSNIGNAILYECICCAASIYPNPKLIEAAADVVAKFLKSDTHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKHSASYITGKLCDVAEAYSDDVTVKEYATSALMKIYAFEVAAGRKVDLLPECQMLIEEMLASHSTDLQQRAYELQALIGLDRQAVKAVMPRDASCEDIEVDKNLSFLNDYVQQSIERGAQPYIPEDVRAGMEDMSNFRGQDKHEPSHHGLRFEAYELPKVPPPSKDSPVSIASSTDLVPVPEALYSRESHQISSAASASEAGSSGLKLRLDGVQRKWGRPTYSSPAPSNAPESSSQKPVNGMTQVNGASAVNSNVRDSYDSRKTPVEISPQKQKLAGLLFGGSSKHERKSSAGHKAPKANASAADRSQESKIAVASNEAAGEKTSQQPPPDLLDLGEPTVTTAPHSVVDPFKQLEGLLDASPDSTLDHSAGTTAKVPDIMALYGGTTTGEQSASGGYSIPVSGEGNLLSGLSNAPATVTSSSQSVKGPNAKDSLEKDALVRQLGVNPSSQNPNLFKDLFG 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0853 963 MobiDBLite consensus disorder prediction 806 827 - -
Lele50g0853 963 PIRSF AP4_epsilon 1 830 IPR017109 GO:0015031|GO:0030124
Lele50g0853 963 PIRSF AP4_epsilon 920 963 IPR017109 GO:0015031|GO:0030124
Lele50g0853 963 MobiDBLite consensus disorder prediction 720 771 - -
Lele50g0853 963 MobiDBLite consensus disorder prediction 916 932 - -
Lele50g0853 963 MobiDBLite consensus disorder prediction 916 938 - -
Lele50g0853 963 MobiDBLite consensus disorder prediction 724 771 - -
Lele50g0853 963 Gene3D - 3 595 IPR011989 -
Lele50g0853 963 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 15 819 - -
Lele50g0853 963 Pfam Adaptin N terminal region 49 582 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lele50g0853 963 MobiDBLite consensus disorder prediction 786 835 - -
Lele50g0853 963 SUPERFAMILY ARM repeat 10 589 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0853 Lele-ChrLele50 5327034 5333856 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0853 50 5327034 5333856 Lele50g0853 50 5327034 5333856 ECH
Lele50g0853 50 5327034 5333856 Lele51g0839 51 5103402 5111009 hybridization
Lele50g0853 50 5327034 5333856 Lele52g0840 52 5388846 5395656 hybridization