Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0774 ATGACTTTTACCTCGTGCGCTCCTCGCTTCTCTTGGCTTCTTCCTCCTCCTCCTCCTCCAAGTCTCCCTAAACTATGCGAAGCATGTGCCGTTCACTGTGACAACACTTATTTTCTGCCTCGCCTCCTGGGGAGTTCCTCAGTTTCATTCAATATATCAAAATTCATCAAGGCTAAAGCTTCTGTGAGCGAGAGCGATCATGAAATTTCAGAAAACAACGTTTCCGAGTTACTGGACCAAGAGTTGCTCGCAAGAATTGCTTCTGCTGAAGATGCCAATGAGGCATTGCAGATGATCGCTGAACAGTCTAGAAGAGATGAAGGTGTCGTTGGCACGAGTGATTGTTGGTCCATTATATCGGCTGCACTTAATCGAAACAATGCGGAGCTGGCTTTGTCAGTATTTTTCGCTATGCGCGCTAGTTTTAATCAAGTTGCTGAGAACGGCCCTTTGGTTAAGAGATGGAAGTGGTCCAGGCCAAATGCACATGTTTACACATTGTTGATTCAGGGTCTTGCATCATCATTGAGGGTTTCAGACGCTCTTAGGGTGATTAAATATATTTGTGAAGTGGCAGTATCTCCTGGTGAGGAGGTGCCGTTTGGAAAGATAGTGAGATGTCCTAGTTGTAGGATAGCTGTTGCTGTTGCGCAACCACAACAAGGTATTCAGTTGGTATCCTGTGCAAAGTGTCGCTACCAATATGAACTTGTTTCTGGTGACATAATCAGTATTCAATCAGAAGAAATCAGCATGGATATTACGCCATGGGAAAGGGGGTTAAAATTCCTTCAACTGAAGAAGCAAAGCATTCCTGCTGCAGTTCATTCTATTGTGGTGCAGACCCCTTCAGGTATGGCGCGTACACATAGATTTGCAACTGAAACAGTTGATGTGCCAGCACAAGTAGGAGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGCCTATAGAGCGGTGGGCCCCTTTAGATTTAGTCCCAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCTTGACGAACCACAAAGATGGCCGAGAATCACTTCTATTAAGAGCCCCAAGAAAAGAAGGAAATTTATCATTGCTTCAACCGTCTTTCCTCTTTCCTCTTCTTGCTATCTTTGCAACTGGTGATGCTGCATCTGGACTAATTGACCCCAGCCTGCCCCAGTTTATATCTGTTGTTGCAGTTTCATCTCTTGCTGTTGGGGCAACACTGAATTCTTTTGTTTTTCCCCAGTTGAATCAGCTTCCACAAGGATCAGTCGAAGCAATTGCTATCAAACAGCAACTTTTATCTCAATATGATGTGCTTCAGTCTCGAATCAAAGACCTAAAAGAAGCTTCTGAAAAAGAGGTATGGATGTTGGCTCGAATGTGCCAACTGGAAAACAAAATTTCTGTTGTTGGAGAACCTTCATATCGGGCTCGTAAAAGTAGAATCAAGAGGGTGCAAGAGAGCTTGCAGAAGTCCCTCAGGGGACGGATTGAACTAATTGACAGCTATGCCAAAATCTCTTCAATGATTGAAATTGAGGTGGAGATGGACACTGATGTTCCTGCAGCTGAAACTGCCAGCAATGCGGATAATATCATGGAACAGATACAACAAATCATGGAGCTCGAAAATCTTGAGGAGAGATGGAAAATACAAGCTGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCGCAGTCCTTACCTAATGAAGAAGTTTAA 1728 0.4421 MTFTSCAPRFSWLLPPPPPPSLPKLCEACAVHCDNTYFLPRLLGSSSVSFNISKFIKAKASVSESDHEISENNVSELLDQELLARIASAEDANEALQMIAEQSRRDEGVVGTSDCWSIISAALNRNNAELALSVFFAMRASFNQVAENGPLVKRWKWSRPNAHVYTLLIQGLASSLRVSDALRVIKYICEVAVSPGEEVPFGKIVRCPSCRIAVAVAQPQQGIQLVSCAKCRYQYELVSGDIISIQSEEISMDITPWERGLKFLQLKKQSIPAAVHSIVVQTPSGMARTHRFATETVDVPAQVGERVTVAVAAPSNAYRAVGPFRFSPRAPDFYPGEAMCLTNHKDGRESLLLRAPRKEGNLSLLQPSFLFPLLAIFATGDAASGLIDPSLPQFISVVAVSSLAVGATLNSFVFPQLNQLPQGSVEAIAIKQQLLSQYDVLQSRIKDLKEASEKEVWMLARMCQLENKISVVGEPSYRARKSRIKRVQESLQKSLRGRIELIDSYAKISSMIEIEVEMDTDVPAAETASNADNIMEQIQQIMELENLEERWKIQAEANDEAERLLSSQSLPNEEV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0774 575 Coils Coil 544 564 - -
Lele52g0774 575 Coils Coil 86 106 - -
Lele52g0774 575 Coils Coil 431 451 - -
Lele52g0774 575 Gene3D Tetratricopeptide repeat domain 67 200 IPR011990 GO:0005515
Lele52g0774 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 45 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0774 Lele-ChrLele52 4894378 4900666 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0774 52 4894378 4900666 Lele52g0774 52 4894378 4900666 ECH
Lele49g0745 49 4526274 4532308 Lele52g0774 52 4894378 4900666 hybridization
Lele50g0787 50 4848799 4854625 Lele52g0774 52 4894378 4900666 hybridization