Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0787 ATGACTTTTACCTCGTGCGCTCCTCGCTTCTCTCGGCTCCTTCTTCCTCCTCCTCCTTCAAGTTTCCCTAAACTATGCGAAGCATGTGCCGTTCACTGTGACAACACTTATTTTCTGCCTCGCCTCATGGGGAGTTCCTCAGTTTCATTCAATATATCGAAATTCATCAAGGCTAAAGCTTCTTTGAGCGAGAGCGATCATGAGATTTCAGAAAACAACGTTTCCGAGTTACTGGAGCAAGAGTTGCTAGCAAGAATTGCTGCTGCTGAAGACGCCAATGAGGCATTGCAGATGATCGCTGAAAAGTCTAGAAGAGATGAAGGTGTCGTTGGCACGAGTGATTGTTGCTCCATTATATCGGCTGCACTTAATCGAAGCAATGTGGAGCTGGTTTTGTCAGTATTTTTCTCTATGCGCGCTAGTTTTAATCAAGTTGCTGAGAACGTCCCTTTGGTTAAGAGATGGAAGTGGTCCAGGCCAAATGCACATGTTTACACATTGTTGATTCAGGGTCTTGCATCATCATTGAGGGTTTCAGAGGCTCTTATGGTGATTAAATATATTTGTGAAGTGGCAGTATCTCCTGGTGAGGAGGTGCCGTTTGGAAAGATAGTGAGATGTCCGAGTTGTAGGATAGCTGTTGCTGTTGCGCAGCCACAACAAGGTATTCAGTTGGTATCCTGTGCAAAGTGTCGCTACCAATATGAACTTGTTTCTGGTGACATAATCAGTATTCAATCAGAAGAAATCAGCATGGATATTACGCCATGGGAAAGGGGGTTAAAATTCCTTCAACTGAAGAAGCAAAGCATTCCTGCTGCTGTTCATTCTATTGTGGTGCAGACCCCTTCAGGTATGGCGCGTACGCATCGATTTGCAACTGAAACAGTTGATGTGCCAGCACAAGTAGGAGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGTCTATAGAGCGGTGGGCCCCTTTAGATTTAGTCCCAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCTTGACGAACCACAAAGATGGCCGAGAATCACTTCTATTAAGAGCCCCAAGAAAAGAAGGAAATTCATCATTGCTTCAACCGTCTTTCCTCTTTCCTCTTCTTGCTGTCTTCGCAACTGGTGATGCTGCATCTGGACTTATTGACCCCAGCCTGCCCCAGTTTATATCTGTTGTTGCAGTGTCATCTCTTGCTGTTGGGGCAACACTGAATTCTTTTGTTTTTCCCCAGCTGAATCAGCTTCCACAAGGATCAGTCGAAGCAATTGCTATCAAACAGCAACTTTTATCTCAATATGATGTGCTTCAATCTCGAATCAAAGACCTAAAAGAAGCTTCTGAAAAAGAGGTATGGATGTTGGCTCGAATGTGCCAACTGGAAAACAAAATTTCTGTTGTTGGAGAACCTTCATATCGGGCTCGTAAAAGTAGAATCAAGAGGGTGCAAGAGAGCTTGCAGAAGTCCCTCAGGGGACGGATTGAACTAATTGACAGCTATGCCAAAATCTCTTCAATGATTGAAATTGAGGTGGAGATGGACTCTGACGTTCCTGCAGCTGAAACTGCCAGCAATGCGGATAATATCATGGAACAGATACAACAAATCATGGATCTCGAAAATTTTGAGGAGAGATGGAAAATACAAGCTGAAGCCAATGATGAGGTTGAAAGACTTCTTAGTTCGCAGTCCTTACCTAATGAAGAAGTTTAA 1728 0.4421 MTFTSCAPRFSRLLLPPPPSSFPKLCEACAVHCDNTYFLPRLMGSSSVSFNISKFIKAKASLSESDHEISENNVSELLEQELLARIAAAEDANEALQMIAEKSRRDEGVVGTSDCCSIISAALNRSNVELVLSVFFSMRASFNQVAENVPLVKRWKWSRPNAHVYTLLIQGLASSLRVSEALMVIKYICEVAVSPGEEVPFGKIVRCPSCRIAVAVAQPQQGIQLVSCAKCRYQYELVSGDIISIQSEEISMDITPWERGLKFLQLKKQSIPAAVHSIVVQTPSGMARTHRFATETVDVPAQVGERVTVAVAAPSNVYRAVGPFRFSPRAPDFYPGEAMCLTNHKDGRESLLLRAPRKEGNSSLLQPSFLFPLLAVFATGDAASGLIDPSLPQFISVVAVSSLAVGATLNSFVFPQLNQLPQGSVEAIAIKQQLLSQYDVLQSRIKDLKEASEKEVWMLARMCQLENKISVVGEPSYRARKSRIKRVQESLQKSLRGRIELIDSYAKISSMIEIEVEMDSDVPAAETASNADNIMEQIQQIMDLENFEERWKIQAEANDEVERLLSSQSLPNEEV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0787 575 Gene3D Tetratricopeptide repeat domain 57 200 IPR011990 GO:0005515
Lele50g0787 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 45 574 - -
Lele50g0787 575 Coils Coil 79 106 - -
Lele50g0787 575 Coils Coil 431 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0787 Lele-ChrLele50 4848799 4854625 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0787 50 4848799 4854625 Lele50g0787 50 4848799 4854625 ECH
Lele50g0787 50 4848799 4854625 Lele51g0767 51 4636599 4643512 hybridization
Lele50g0787 50 4848799 4854625 Lele52g0774 52 4894378 4900666 hybridization