Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0745 ATGACTTTGACCACGTGCACTCCTCGCTTCTCCCGACTTCTTCCTCCTCCTCCTCCTTCTCCTTCAAGTCTCCCTAAACTATGTGAAACATGTACTGTTCACGGTGACAACACTTCTTTTCTGCCTCGCCTCCTGGGGAGTTCCTCAGTTTCGTTCAATATATCGAAATTCATCAAGGCTAAAGCTTCTGTTAGCGAGAGCGATCATGAGATTTCAGAAAACAACGTTTCCGAGTTACTGGACCAAGAGTTTCTCGCAAGAATTGCTGCTGCTGAAGACGCCAATGAGGCATTGCAGATGATCGCTGAAAAGTCTAGAAGAGATGAAGGTGTCGTTGGCACGAGTGATTGTTGCTCCATTATATCGGCTGCACTTAATCGAAACAACGCGGAGCTGGCTTTGTCAGTATTTTTCGCTATGCGCGCTAGTTTTAATCAAGATGCTGAGAACGGCCCTTTGGTTAAGAAATGGAAGTGGTCCAGGCCAAATGCACTTGTTTACACATTGTTAATTCAGGGTCTGGCATCAGCATTGAGGGTTTCAGACGCTCTTAGGGTGCCATTTGGAATGATAGTGAGATGTCCTAGTTGTAGGATAGCTGTTGCCGTCGCCCAGCCACAACAAGGTATTCAGTTGGTATCCTGTGCAAAGTGTCGCTACCAATATGAACTTGTTTCTGGTGACATAATCGGTATTCAATCAGAAGAAATCAGATTTGCAACTGAAACAGTTGATGTGCCAGCACAAGTAGGAGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGTCTATAGAGCGGTGGGCCCCTTTAGATTTAGTCCTAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCTTGACGAACCACAAAGATGGCCGAGAATCATTTCTATTAAGAGCCCCAAGAAAAGAAGGAAATTCATCATTGCTTCAACCCTCTTTCCTCTTTCCTCTTCTTGCTGTCTTTGCAACTGGTGATGCTGCATCTGGACTTATTGACCCCAGCCTGCCCCAGTTTATATCAGTTGTTGCAGTTTCATCTCTTGCTGTTGGGGCAACACTGAATTCTTTTGTTTTTCCCCAGTTGAATCAGCTTCCACAAGGATCAGTCGAAGCAATCGCTATCAAACAGCAACTTTTATCTCAATATGATGTTCTTCAGTCTCGCATCAAAGACCTAAAAGACGCTTCTGAAAAAGAGTTAACCATTTATGTTGGTCTACTGTCAAGTTTTTATATTTTTCCTTCCCCTTCTTCTAGGGCTCGTAAAACTAGAATCAGAAGGGTGCAAGAGAGCTTGCAAAAGTCCCTTAGGGGACGGATTGAATTGATTGACAGCTATGCCAGAATCTCTTCAATGATTGAAATTGAGGTGGAGATGGACACTGATGTTCCTGCAGCTGAAACTGTCAGCAATGCGGATAGCATCATGGAACAAATACAACAAATCATGGAGCTCGAAAATCTTGAGGAGGAAATTGGAACGGAATTGTATTCCGATGATATGGGATCTGAAACGGGCCAAGGGTGGATCACACTTCACACAGCACATAGTGGGTAA 1566 0.4451 MTLTTCTPRFSRLLPPPPPSPSSLPKLCETCTVHGDNTSFLPRLLGSSSVSFNISKFIKAKASVSESDHEISENNVSELLDQEFLARIAAAEDANEALQMIAEKSRRDEGVVGTSDCCSIISAALNRNNAELALSVFFAMRASFNQDAENGPLVKKWKWSRPNALVYTLLIQGLASALRVSDALRVPFGMIVRCPSCRIAVAVAQPQQGIQLVSCAKCRYQYELVSGDIIGIQSEEIRFATETVDVPAQVGERVTVAVAAPSNVYRAVGPFRFSPRAPDFYPGEAMCLTNHKDGRESFLLRAPRKEGNSSLLQPSFLFPLLAVFATGDAASGLIDPSLPQFISVVAVSSLAVGATLNSFVFPQLNQLPQGSVEAIAIKQQLLSQYDVLQSRIKDLKDASEKELTIYVGLLSSFYIFPSPSSRARKTRIRRVQESLQKSLRGRIELIDSYARISSMIEIEVEMDTDVPAAETVSNADSIMEQIQQIMELENLEEEIGTELYSDDMGSETGQGWITLHTAHSG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0745 521 Coils Coil 378 398 - -
Lele49g0745 521 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 238 494 - -
Lele49g0745 521 MobiDBLite consensus disorder prediction 1 22 - -
Lele49g0745 521 Coils Coil 88 108 - -
Lele49g0745 521 Gene3D Tetratricopeptide repeat domain 78 201 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0745 Lele-ChrLele49 4526274 4532308 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0745 49 4526274 4532308 Lele49g0745 49 4526274 4532308 ECH
Lele49g0745 49 4526274 4532308 Lele51g0767 51 4636599 4643512 hybridization
Lele49g0745 49 4526274 4532308 Lele52g0774 52 4894378 4900666 hybridization