Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0766 ATGCACCATACCAGAACTTATAACTTGCTGAAGCTTTTGCATGATATGTATTTTCAGCTGATGAATATACGTATGCAGTTATTTGATCAGAACACCGTATATTCAGAGCCGAGAAGGCTAGAACTGATAAATTCTCTGAGTTTTAATCTGAAACTCAAAATATTAGAGGCAGTCTTCATGTTGAACTTGTTTTCTCTGAGGAGTCTGTCATGGGGTTCCCGTACTGGTGGTCAGGGAAAGGTTGAGCTAACTGCTGCAGAAGTAGACTCACTTCAATCAGAACTTGCTGATTTAGAAGAGAGGGAAGCTCACTTAAAAGCTCAGTTGGATCATATTGATGAAATTCTTCGGTCAGCTCGTCTATCTGGCTACATGTACATCAGGACGAGATGGACAGCGCTACCAGGAGATCCTCCGCCCATAGATGATTCCGATGTAAATGATTGGGTTCCTCGCTTTATTGTTCTCCATGGAGCATGTGTTTTCATATATTTGTCATGTTCAGATCTAAGTCCTCAAGACACCACTCCACTATCTGATATTACTGAAGTGGGGCTTCTTCCGAGTTTTAAATTGGAGGATGATGAGACACAATATGCCTTTTATATTTTATCTCGTTTAGGATTTCGATATGAGTGCTCAAGCAGTTCAAAGATACAGGTGGACTTCTGGTTGTCAGCTCTACGAACTGACTGCAAATTGGAGTTTAATACATCAGTTCCCAATGGTTCAATCAAGGTTTGGTAA 747 0.407 MHHTRTYNLLKLLHDMYFQLMNIRMQLFDQNTVYSEPRRLELINSLSFNLKLKILEAVFMLNLFSLRSLSWGSRTGGQGKVELTAAEVDSLQSELADLEEREAHLKAQLDHIDEILRSARLSGYMYIRTRWTALPGDPPPIDDSDVNDWVPRFIVLHGACVFIYLSCSDLSPQDTTPLSDITEVGLLPSFKLEDDETQYAFYILSRLGFRYECSSSSKIQVDFWLSALRTDCKLEFNTSVPNGSIKVW 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0766 248 PANTHER OS05G0595500 PROTEIN 55 233 - -
Lele52g0766 248 Gene3D - 117 239 IPR011993 -
Lele52g0766 248 ProSiteProfiles PH domain profile. 118 233 IPR001849 -
Lele52g0766 248 SUPERFAMILY PH domain-like 112 230 - -
Lele52g0766 248 Coils Coil 81 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0766 Lele-ChrLele52 4855300 4857757 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0766 52 4855300 4857757 Lele52g0766 52 4855300 4857757 ECH
Lele49g0738 49 4492554 4493928 Lele52g0766 52 4855300 4857757 hybridization
Lele50g0779 50 4804880 4811361 Lele52g0766 52 4855300 4857757 hybridization