Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0752 ATGACGATCGAGGCCAAAGGCAAAGACGACCCCGTTACGGACATCCCCCGCGACGACGACCCCGGAGCCGCTTTCGTCCTTCAGTCTAAAGGGTCTGGGTGGATGTTCTATTTCGTAATATTTATTCAAACGGCAATCAACACTGGGGTTGGTGTGGGCGCCATTTTGCTTGCGGGCCAGTGCCTTGAGATCGTGTATTCCAACCTTTCGCCTCATGGACCCCTCAAATTGTACCATTTTATAGCAATGGTGACAGTGGTCATGATAGTCCTCTCTCAGCTTCCAACCTTCCATTCTCTACGACATATCAACATGTGCTCTCTGCTTCTCAGCCTCGGCTACAGTTTCCTAGTGGTTGGTGCTTGCATTCACGCAGGTTTATCAGCAAAAAGCCATTCAACGGACTATTCCCTGGAACCCAGACAGTCTGCACGGGTTTTTAGTGCCTTCACTTCCATCTCCATAATCGCATCCATATTTGGCAATGGAATTCTGCCCGAGATACAAGCAACTCTAGCACCACCTGCAACGGGAAAGATGGTGAAGGGGCTTTTCATGTGCTATGGTGTGATTTGCGTCACTTTCTACTCTGTTGCAGTGACTGGATATTGGGTGTTTGGAAACAAGTCAAGTTCAAACATTCTTAAGAGTCTACTGCCAGATGAAGGAACTTCTTTAGCTCCAACATGGGTGCTTGGCCTTGCTGTTATCTTTGTTCTTCTTCAACTCTTCGCGATTGGCCTGGTTTATTCTCAAGTGGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAAGCAGGGGATGTTTTCCAAGAGAAATCTCATCCCTCGCATAATTCTTCGGACAATTTACATGATACTATGTGGGTTTGTGGCGGCCATGCTCCCATTTTTTGGGGACATCAATGGTGTTGTCGGGGCTGTCGGTTTCATCCCTCTGGATTTTGTTCTTCCGATGCTTCTATACAACACGACGCACAAGCCTCCCAGAACATCCGTCACCTATTGGATCAACATGTCCATCACTATCGTCTTCACATGTGCTGGAATTATGGGCGCATTCTCTTCCATGAGGAAACTGGTTCTTGATGCCAACCAATTTAAGCTCTTTAGTAGCAATGTTATTGATTAA 1134 0.4665 MTIEAKGKDDPVTDIPRDDDPGAAFVLQSKGSGWMFYFVIFIQTAINTGVGVGAILLAGQCLEIVYSNLSPHGPLKLYHFIAMVTVVMIVLSQLPTFHSLRHINMCSLLLSLGYSFLVVGACIHAGLSAKSHSTDYSLEPRQSARVFSAFTSISIIASIFGNGILPEIQATLAPPATGKMVKGLFMCYGVICVTFYSVAVTGYWVFGNKSSSNILKSLLPDEGTSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGMFSKRNLIPRIILRTIYMILCGFVAAMLPFFGDINGVVGAVGFIPLDFVLPMLLYNTTHKPPRTSVTYWINMSITIVFTCAGIMGAFSSMRKLVLDANQFKLFSSNVID 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0752 377 Pfam Transmembrane amino acid transporter protein 32 360 IPR013057 -
Lele52g0752 377 PANTHER OS05G0424000 PROTEIN-RELATED 33 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0752 Lele-ChrLele52 4753718 4756881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0752 31 377 Organic Solute Cotransporters AT5G41800 78.963 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0752 52 4753718 4756881 Lele52g0752 52 4753718 4756881 ECH
Lele49g0724 49 4411328 4414532 Lele52g0752 52 4753718 4756881 hybridization
Lele50g0764 50 4710145 4713670 Lele52g0752 52 4753718 4756881 hybridization