Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0764 ATGACGATCGAGGCCAAAGGCAAAGACGACCCCGTCAAGGACATACCCCGCGACGACGACGCCGGAGCCGCTTTCGTCCTTCAGTCTAAAGGTAAGTGGTGGCATGCGGGGTTCCATTTGACTACGGCGATAGTCGGACCCACCATACTCACGTTGCCATACGCCTTCAGAGGATTGGGATGGGGTTTGGGGTTCTTCTGCTTGACGGCAATGGGCGTCGTCACCTTCTACTCCTACCTCCTCATGTCCAATGTGCTCGATCACTGCGAGAGAGCCGGCCGACGTCACATCCGTTTCCGGGAACTCGCTGCCGACGTCTTGGGGTCTGGGTGGATGTTCTATTTCGTAATATTTATTCAAACGGCAATCAACACTGGGGTTGGTGTGGGCGCCATTTTGCTTGCGGGCCAGTGCCTTGAGATCGTGTATTCCAACCTTTCGCCGCATGGACCCCTCAAATTGTACCATTTTATAGCAATGGTGACAGTGGTCATGATAGTCCTCTCTCAGCTTCCAACCTTCCATTCTCTACGACACATCAACATGTGCTCTCTGCTTCTCAGCCTCGGCTACAGTTTCCTAGTGGTTGGTGCTTGCATTCACGCAGGTTTATCAGCAGAAAGCCATTCAACGGACTATTCCCTGGAACCCAGACAGTCTGCACGGGTTTTTAGTGCCTTCACTTCCATCTCCATAATGGCATCCATATTTGGCAATGGAATTCTGCCCGAGATACAAGCAACTCTAGCACCACCTGCAACAGGAAAGATGGTGAAGGGGCTTTTCATGTGCTATGGTGTGATTTGCGTCACTTTCTACTCTGTTGCAGTGACTGGATATTGGGTGTTTGGAAACAAGTCAAGTTCAAACATTCTTAAGAGTCTACTGCCAGATGAAGGACCTTCTTTAGCTCCAACATGGGTGCTTGGCCTTGCTGTCATCTTTGTTCTTCTTCAACTCTTCGCGATTGGCCTGGTTTATTCTCAAGTGGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAAGCAGGGGATGTTTTCCAAGAGAAATCTTATCCCTCGCATAATTCTTCGGACAATTTACATGATAGTATGTGGGTTTGTGGCGGCCATGCTCCCATTTTTTGGGGACATCAATGGGGTGGTCGGTGCTGTCGGTTTCATCCCTCTGGATTTTGTTCTACCGATGCTTCTATACAACATGACGCACAAGCCTCCCAGATCATCCTTCACCTATTGGATCAACATGTCCATCATTATCGTCTTCACATGTGCTGGAATTATGGGCGCATTCTCTTCCACGAGGAAACTGGTTCTTGACGCCAACCAATTTAAGCTCTTTAGTAGTGATGTTATTGATTAA 1365 0.4864 MTIEAKGKDDPVKDIPRDDDAGAAFVLQSKGKWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTAMGVVTFYSYLLMSNVLDHCERAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGQCLEIVYSNLSPHGPLKLYHFIAMVTVVMIVLSQLPTFHSLRHINMCSLLLSLGYSFLVVGACIHAGLSAESHSTDYSLEPRQSARVFSAFTSISIMASIFGNGILPEIQATLAPPATGKMVKGLFMCYGVICVTFYSVAVTGYWVFGNKSSSNILKSLLPDEGPSLAPTWVLGLAVIFVLLQLFAIGLVYSQVAYEIMEKKSADVKQGMFSKRNLIPRIILRTIYMIVCGFVAAMLPFFGDINGVVGAVGFIPLDFVLPMLLYNMTHKPPRSSFTYWINMSIIIVFTCAGIMGAFSSTRKLVLDANQFKLFSSDVID 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0764 454 Pfam Transmembrane amino acid transporter protein 30 438 IPR013057 -
Lele50g0764 454 PANTHER OS05G0424000 PROTEIN-RELATED 32 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0764 Lele-ChrLele50 4710145 4713670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0764 8 454 Organic Solute Cotransporters AT5G41800 79.642 0.0 736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0764 50 4710145 4713670 Lele50g0764 50 4710145 4713670 ECH
Lele50g0764 50 4710145 4713670 Lele51g0745 51 4515520 4516654 hybridization
Lele50g0764 50 4710145 4713670 Lele52g0752 52 4753718 4756881 hybridization