Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0724 ATGACGATCGAGGCCAAAGGCAAAGGCGACCCCGTCGTCGCGGACATTCCCCGCGACGACGACGCCGGAGCTGCTTTCGTCCTTCAGTCTAAAGGTAAGTGGTGGCATGCGGGGTTCCATTTGACGACGGCGATTGTCGGACCCACCATACTCACGCTGCCTTACTCCTTCAGAGGATTGGGATGGGGATTGGGCTTCTTTTGCTTGACGGCGATGGGCGTCGTCACCTTCTACTCCTACCTCCTTATGTCCAAAGTGCTGGATCACTGCGAGAGAGCCGGCCGACGCCACATCCGTTTCCGGGAACTCGCGGCAGACGTGTTGGGTTCTGGGTGGATGTTCTATTTCGTAATATTCATTCAAACGGCAATCAACACGGGGGTTGGTGTGGGCGCCATTTTGCTGGCGGGCCAGTGCCTTGAGATAGTGTATTCCAACCTTTCGCCACATGGGCCCCTCAAATTGTACCATTTTATAGCAATGGTGACAGTGGTGATGATAGTCCTCTCTCAGCTTCCAACCTTCCATTCTCTAAGACACATCAATATGTGTTCTCTGCTTCTCAGCCTCGGCTACAGTTTCCTAGTGGTTGGGGCTTGCATTCACGCAGGTCTATCGGCAAAAAGCCATTCAACGGACTATTCCCTAGAACCCAGACAGTCTGCACGGGTTTTTAGTGCCTTCGCTTCCATCTCCATAATTGCATCCATATTTGGGAATGGAATTCTTCCCGAGATACAAGCAACTCTAGCACCACCTGCAACTGGAAAGATGGTGAAAGGGCTTTTCATGTGTTATGGTGTGATTTGCGTAACTTTCTACTCTGTTGCAGTGACTGGATATTGGGTGTTTGGAAACAAGTCCAGTTCCAACATTCTGAAGAGTCTATTGCCAGATGAGGGACCTTCTTTAGCTCCAACATGGGTGCTTGGCCTTGCTGTCATCTTTGTTCTTCTTCAGCTCTTAGCGATTGGCCTGGTTTATTCTCAAGTGGCTTATGAGATAATGGAGAAGAAATCAGCTGATGTGAAGCAGGGGATGTTTGCCAAGAGAAATCTCATACCTCGCATAATTCTTCGGACAATTTACATGATACTATGTGGTTTTGTGGCAGCCATGCTCCCATTTTTTGGGGACATCAATGGTGTCGTTGGTGCTGTTGGTTTCATCCCTCTGGATTTTGTTCTTCCAATGCTTCTATACAACATGACGCACAAGCCTCCCAAATCATCCTTCACCTATTGGATCAACATGTCCATCATTATCGTCTTCACATGTGTTGGAATTATGGGCGCATTCTCTTCCATAAGGAAACTGGTTCTTGATGCCAACCAATTTAAGCTCTTCAGTAGTGATGTTGTTGATTAA 1368 0.4817 MTIEAKGKGDPVVADIPRDDDAGAAFVLQSKGKWWHAGFHLTTAIVGPTILTLPYSFRGLGWGLGFFCLTAMGVVTFYSYLLMSKVLDHCERAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGVGAILLAGQCLEIVYSNLSPHGPLKLYHFIAMVTVVMIVLSQLPTFHSLRHINMCSLLLSLGYSFLVVGACIHAGLSAKSHSTDYSLEPRQSARVFSAFASISIIASIFGNGILPEIQATLAPPATGKMVKGLFMCYGVICVTFYSVAVTGYWVFGNKSSSNILKSLLPDEGPSLAPTWVLGLAVIFVLLQLLAIGLVYSQVAYEIMEKKSADVKQGMFAKRNLIPRIILRTIYMILCGFVAAMLPFFGDINGVVGAVGFIPLDFVLPMLLYNMTHKPPKSSFTYWINMSIIIVFTCVGIMGAFSSIRKLVLDANQFKLFSSDVVD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0724 455 PANTHER OS05G0424000 PROTEIN-RELATED 33 432 - -
Lele49g0724 455 Pfam Transmembrane amino acid transporter protein 31 439 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0724 Lele-ChrLele49 4411328 4414532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0724 19 455 Organic Solute Cotransporters AT5G41800 80.549 0.0 731
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0724 49 4411328 4414532 Lele49g0724 49 4411328 4414532 ECH
Lele49g0724 49 4411328 4414532 Lele51g0745 51 4515520 4516654 hybridization
Lele49g0724 49 4411328 4414532 Lele52g0752 52 4753718 4756881 hybridization