Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0702 ATGTCTTCAGCAACAGTTCGTAGATTCACAATGGCAGCCATCTCCAATTCATTGTCCCTGAAGCACGGCCTCTCACTTTGGTGTCCTCAAACCGGGTCTCTCAATCGAGCTAACCCTTCTTCTTCTATCAAGTTCAGAACCTTCTCGAGATGCTATGCCGCTTTCGCTAATGAAAATCGGGAGTATGTGATTGTTGGGGGTGGAAATGCCGCAGGATATGCTGCACGAACTTTCGTCGAGCACGGCATGGCGGATGGACGTCTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTAACAAAAGGTTATCTATTCCCGCCAGATAAGAACCCTGCGCGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGTGAGAGGCAGACTCCAGAGTGGTATGAGGAGAAAGGGATAGAGATGATATATCAAGATCCAGTAAAAAGCATTGATATTGAACAGCAAACGTTGACAACAAATTCAGGAAAACTGCTTAAGTATGGTTCACTTATTATTGCCACAGGATGTACAGCCTCAAGATTCCCAGAGAAAATTGGGGGCAATCTACCTGGTGTTCATTACATCCGTGATGTTGCAGATGCTGATTCTCTGGTTTCATCATTGGGGAAAGCACGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAAGTTGCTGCTGCTGCTGTTGGCTGGCAGCTTGATACAACAATTATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTCCTTCTCTTGCTCGAAGATATGAAGAACTCTACCAGAAGAACGGTGTCAAAATCTTAAAGGGTGCTTCTATAAAAAACTTGGAAGCCGATTCCAATGGGCACGTAACTGCTGTGAAACTTGGAGATGGATCTACTATAGATGCAGATACAGTAATTGTGGGCATTGGAGCAAAACCTGCAGTTGGTCCCTTTGAGAGGGTAGGTCTGAATAGAGATATCGGTGGCATACAGGTGGATGGTCAGTTTCGGACAAGCACTCCTGGAATCTTTGCCATTGGTGATGTAGCAGCTTTCCCACTGAAGATATATGATCGTATCACTCGAGTTGAACATGTGGATCATGCTCGTCGCTCTGCAAATCATTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTACGATTATCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCTCTAGGAAAGTTTGGTGGCAATTTTTCGGAGACAATGTTGGGGAAACAGTTGAAATTGGGAATTTCGATCCTAAAATTGCTACATTCTGGATTGAATCAGGCAAGCTGAAAGGAGTTCTCCTTGAAAGTGGGAGGCCCGAGGAATTTCAGCTGCTGCCTAAACTTGCCAGAAGTCAGCCTGTGGTTGATAAAGCCAAACTTGAAAAGGCATCTTCAGTGGAGGATGCCCTAGCCATTGTTGGGGCATCCTTGGGTTGA 1476 0.4512 MSSATVRRFTMAAISNSLSLKHGLSLWCPQTGSLNRANPSSSIKFRTFSRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGERQTPEWYEEKGIEMIYQDPVKSIDIEQQTLTTNSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEVAAAAVGWQLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEADSNGHVTAVKLGDGSTIDADTVIVGIGAKPAVGPFERVGLNRDIGGIQVDGQFRTSTPGIFAIGDVAAFPLKIYDRITRVEHVDHARRSANHCVKALLSAQTHTYDYLPYFYSRVFEYEGSSRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGRPEEFQLLPKLARSQPVVDKAKLEKASSVEDALAIVGASLG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0702 491 SUPERFAMILY FAD/NAD(P)-binding domain 57 357 IPR036188 -
Lele52g0702 491 Gene3D - 63 377 IPR036188 -
Lele52g0702 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 305 319 - -
Lele52g0702 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 61 83 - -
Lele52g0702 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 345 352 - -
Lele52g0702 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 217 242 - -
Lele52g0702 491 Gene3D - 185 312 IPR036188 -
Lele52g0702 491 PANTHER APOPTOSIS-INDUCING FACTOR 1 60 479 - -
Lele52g0702 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 304 320 - -
Lele52g0702 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 63 82 - -
Lele52g0702 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 330 352 - -
Lele52g0702 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 217 235 - -
Lele52g0702 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 171 189 - -
Lele52g0702 491 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 375 IPR023753 GO:0016491
Lele52g0702 491 Gene3D - 395 480 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0702 Lele-ChrLele52 4423263 4427369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0702 168 421 Acyl Lipid Metabolism Gene Families AT3G17240 24.265 7.02e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0702 52 4423263 4427369 Lele52g0702 52 4423263 4427369 ECH
Lele49g0678 49 4116465 4120564 Lele52g0702 52 4423263 4427369 hybridization
Lele50g0710 50 4372289 4376368 Lele52g0702 52 4423263 4427369 hybridization