Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0710 ATGTCTTCAGTTCGTAGATTCACAATGGCAGCCATTTCCAATTCCTTGTCCCTGAAGCACGGCCTCTCACTTTGGTGTCCTCAAACCTTGTCTCTCAATCGAGCTAACCCTTCTTCTTCAATCAAGTTCAGAACCTTCTCGAGATGCTACGCCGCTTTCGCTAATGAAAATCGGGAGCATGTGATTGTTGGGGGTGGAAATGCCGCAGGATATGCTGCACGAACTTTCGTCGAGCACGGCATGGCGGATGGACGTCTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTAACAAAAGGTTATCTATTCCCGCCAGATAAGAACCCTGCACGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGTGAGAGGCAGACTCCAGAGTGGTATGAGGAGAAAGGGATAGAGATGATTTATCAAGATCCAGTAAAAAGCATTGATATTGAACAGCAAACGTTGACGACAAATTCAGGAAAACTGCTCAAGTATGGTTCACTTATTATTGCCACAGGATGTACAGCCTCAAGATTCCCAGAGAAAATTGGGGGCAATCTACCTGGTGTTCATTACATCCGTGATGTTGCAGATGCTGATTCTCTGGTTTCATCATTGGGGAAAGCACGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAAGTTGCTGCTGCTGCTGTTGGCTGGCAGCTTGATACAACAATTATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTCCTTCTCTTGCTCGAAGATATGAAGAACTCTACCAGAAGACCGGTGTCAAAATCTTAAAGGGTGCTTCTATAAAAAACTTGGAAGCCGATTCCAATGGGCATGTAACTGCTGTGAAACTTGGAGATGGATCTACTATAGATGCAGATACAGTAATTGTGGGCATTGGAGCAAAACCTGCAGTTGGTCCCTTTGAGAGGGTAGGTCTGAATAGAGATATCGGTGGCATACAGGTGGATGGTCAGTTTCGGACAAGCACTCCTGGAATCTTTGCCATTGGTGATGTAGCAGCTTTCCCACTGAAGATATATGATCGTATCACTCGAGTTGAACATGTGGATCATGCTCGTCGCTCTGCACATCATTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTACGATTATCTTCCATACTTCTACTCAAGGGTGTTTGAATACGAAGGGAGCTCTAGGAAAGTTTGGTGGCAATTTTTTGGAGACAATGTTGGGGAAACAGTTGAAATTGGGAATTTCGATCCTAAAATTGCTACATTCTGGATTGAATCAGGCAAGCTAAAAGGAGTTCTCCTTGAAAGTGGGAGCCCCGAGGAATTTCAGCTACTTCCCAAACTTGCCAGAAGTCAGCCTGTGGTTGATAAGGCCAAACTTGAAAAGGCATCTTCAGTGGAGGATGCTCTAGCCATTGTTGGGGCATCCTTGGGTTGA 1470 0.451 MSSVRRFTMAAISNSLSLKHGLSLWCPQTLSLNRANPSSSIKFRTFSRCYAAFANENREHVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGERQTPEWYEEKGIEMIYQDPVKSIDIEQQTLTTNSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEVAAAAVGWQLDTTIIFPEDHLLQRLFTPSLARRYEELYQKTGVKILKGASIKNLEADSNGHVTAVKLGDGSTIDADTVIVGIGAKPAVGPFERVGLNRDIGGIQVDGQFRTSTPGIFAIGDVAAFPLKIYDRITRVEHVDHARRSAHHCVKALLSAQTHTYDYLPYFYSRVFEYEGSSRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPVVDKAKLEKASSVEDALAIVGASLG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0710 489 FunFam Monodehydroascorbate reductase 393 480 - -
Lele50g0710 489 Pfam Pyridine nucleotide-disulphide oxidoreductase 60 373 IPR023753 GO:0016491
Lele50g0710 489 PANTHER APOPTOSIS-INDUCING FACTOR 1 59 477 - -
Lele50g0710 489 SUPERFAMILY FAD/NAD(P)-binding domain 57 380 IPR036188 -
Lele50g0710 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 215 240 - -
Lele50g0710 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 59 81 - -
Lele50g0710 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 343 350 - -
Lele50g0710 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 303 317 - -
Lele50g0710 489 Gene3D - 393 478 IPR016156 GO:0016491|GO:0050660
Lele50g0710 489 Gene3D - 183 310 IPR036188 -
Lele50g0710 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 169 187 - -
Lele50g0710 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 302 318 - -
Lele50g0710 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Lele50g0710 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 328 350 - -
Lele50g0710 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Lele50g0710 489 Gene3D - 61 375 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0710 Lele-ChrLele50 4372289 4376368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0710 166 419 Acyl Lipid Metabolism Gene Families AT3G17240 24.265 1.05e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0710 50 4372289 4376368 Lele50g0710 50 4372289 4376368 ECH
Lele50g0710 50 4372289 4376368 Lele51g0697 51 4206904 4211132 hybridization
Lele50g0710 50 4372289 4376368 Lele52g0702 52 4423263 4427369 hybridization