Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0678 ATGGCAGCTATCTCTAATTCCTTGTCCCTGAAGCACGGTCTCTCACTTTGGTGTCCTCAAACCGGGTCTCTCAATCGAGCTAACCCTTCTTCAATCACGTTCAGAACCTTCTCGAGATGCTACGCCGCTTTCGCTAATGAAAATCGGGAGTATGTTATTGTTGGGGGTGGAAATGCCGCAGGATATGCTGCTCGAACTTTCGTCGAGCACGGCATGGCGGATGGACGCCTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTAACAAAAGGTTATCTATTCCCGCCAGATAAGAACCCTGCGCGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGTGTGAGGCAGACTCCAGAGTGGTATGAGGAGAAAGGGATAGAGATGATATATCAAGATCCAGTAAGAAGCATTGATATTGAACAGCAAGCGTTGACAACAAATTCAGGAAAGCTGCTTAAGTATGGTTCACTTATTATTGCGACAGGATGTACAGCCTCAAGATTCCCAGAGAAAATTGGGGGCAATCTACCTGGTGTTCATTACATCCGTGATGTTGCAGATGCTGATTCTCTGGTTTCATCATTGGGGAAAGCACGCAAGGTAGTTGTTGTTGGAGGGGGTTATATAGGAATGGAAGTTGCTGCTGCTGCTGTTGGCTGGCAGCTTGATACAACAGTTATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTCCTTCTCTTGCTCGAAGATATGAAGAACTCTACCAGAAGAATGGTGTCAAAATCTTAAAGGGTGCTTCTATTAAAAACTTGGAAGCCGATTCTAATGGGCATGTAACTGCTGTGAAACTTGGAGATGGATCTACTATAGATGCAGATACAGTAATTGTGGGCATTGGAGCAAAACCTGCAGTTGGTCCCTTTGAGAGGGTAGGTCTGAATAGAGATATTGGTGGCATAGAGGTGGATGGTCTGTTTCGGACAAGCACTCCTGGAATCTTTGCCATTGGTGATGTAGCAGCTTTCCCACTGAAGATATACGATCGTGTCACTCGAGTTGAGCATGTGGATCATGCTCGTCGGTCTGCACATCATTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCTCCAGGAAAGTTTGGTGGCAATTTTTTGGGGACAATGTTGGGGAAACAGTTGAAATTGGGAATTTCGATCCTAAAATTGCTACATTCTGGATTGAATCAGGCAAGCTAAAAGGAGTTCTCCTTGAAAGTGGGAGCCCTGAGGAATTTCAGCTGCTGCCCAAACTTGCCAGAAGTCAGCCTGTGGTTGATAAAGCCAAACTTGAGAAGGCATCTTCAGTGGAGGAGGGCCTAGCCATTGTTGGGGCATCATTGGGTTGA 1443 0.456 MAAISNSLSLKHGLSLWCPQTGSLNRANPSSITFRTFSRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGVRQTPEWYEEKGIEMIYQDPVRSIDIEQQALTTNSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEVAAAAVGWQLDTTVIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEADSNGHVTAVKLGDGSTIDADTVIVGIGAKPAVGPFERVGLNRDIGGIEVDGLFRTSTPGIFAIGDVAAFPLKIYDRVTRVEHVDHARRSAHHCVKALLSAQTHTYDYLPYFYSRVFEYEGSSRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPVVDKAKLEKASSVEEGLAIVGASLG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0678 480 Pfam Pyridine nucleotide-disulphide oxidoreductase 50 364 IPR023753 GO:0016491
Lele49g0678 480 PANTHER APOPTOSIS-INDUCING FACTOR 1 49 466 - -
Lele49g0678 480 Gene3D - 384 470 IPR016156 GO:0016491|GO:0050660
Lele49g0678 480 PRINTS FAD-dependent pyridine nucleotide reductase signature 52 71 - -
Lele49g0678 480 PRINTS FAD-dependent pyridine nucleotide reductase signature 319 341 - -
Lele49g0678 480 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Lele49g0678 480 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Lele49g0678 480 PRINTS FAD-dependent pyridine nucleotide reductase signature 293 309 - -
Lele49g0678 480 Gene3D - 174 301 IPR036188 -
Lele49g0678 480 SUPERFAMILY FAD/NAD(P)-binding domain 45 371 IPR036188 -
Lele49g0678 480 PRINTS Pyridine nucleotide disulphide reductase class-I signature 50 72 - -
Lele49g0678 480 PRINTS Pyridine nucleotide disulphide reductase class-I signature 294 308 - -
Lele49g0678 480 PRINTS Pyridine nucleotide disulphide reductase class-I signature 334 341 - -
Lele49g0678 480 PRINTS Pyridine nucleotide disulphide reductase class-I signature 206 231 - -
Lele49g0678 480 FunFam Monodehydroascorbate reductase 384 471 - -
Lele49g0678 480 Gene3D - 52 366 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0678 Lele-ChrLele49 4116465 4120564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0678 157 410 Acyl Lipid Metabolism Gene Families AT3G17240 25.000 1.99e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0678 49 4116465 4120564 Lele49g0678 49 4116465 4120564 ECH
Lele49g0678 49 4116465 4120564 Lele51g0697 51 4206904 4211132 hybridization
Lele49g0678 49 4116465 4120564 Lele52g0702 52 4423263 4427369 hybridization