Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0701 ATGCCTGCAACAGAATATCAAGGCTCTTTTCTGGGCCGAATAAGTATTCGTCGGAATCAAGTGATGACCATGGAAGGTACCAATGACCAAGAAGTAGAAGACCTCGAGCTTTTCCAGAAACACGTCAGTGACCGATTCGCCGAACTCTTCTCGCCGACTTCCGAAGATTCCACCGCCGATGCTCTCCTTTCTATCGGCTGGCTTAGAAAGCTTCTCGACACGTTTCTCTGCTGCGAGGCCGAATTCAAGGCCGTTCTCATAATGGACCGTGATCCTACTCATATCTCCAAGCCTCCTCTCGACCGTCTCATCCCCGAGCTCCTCGACCGGGTTGTCAAGGCTCTCGATATTTGTAATGCGCTCTGTCTCGGCGTCGAGTCCGTCCGGAACGTTCAGAAACTCGCTGAGATAGCCGTCTCTGCTCTGGAACAGAGGACAATTGGTGATGGCCAGGCTCGACGCGCCAAGAAGGCATTAGACTCCCTGGTCACGGCGACGACGGCGGAGGAAAAGGACGGCAGCACCGCCAAGTCCACCGAGAGAGCCTGGTCTTTTGGAAGGAGGGGTGCTACCAGCGCTCCGGTGAACAAAGAGCGTGTCTCGGGGCAATTCCGGTGGCTATCGTGCAGCATGGCGAAGAATTGGTCTGCCGCCAAACAAATCCACGCCATGTCCTACAATCTGGTGGCACCGCGAGGTGCTGAATCTTCTGGTTTGGCTTCTCCTATCTATATAATGAGCACGATATTTGTGTTGGTGATGTGGACTCTTATCGCGGCTATCCCATGTCAAGAGAGAACCGGGTTGGGGACTCATTTTCCGGTGCCGAGGCAATTGGTTTGGGCTCAACCCATGATAGGGTTGCAGGAGAAGATAGCAGAAGAATGGAAGAAGAAGGAGAAGAAAGGATCTGCGGGACTATTGGATGAGATTCAGAGGTTGGAGAAGATAGGCCAATCCTTGATCGATTTCACTGATTCGTTCCAGTTTCCGGTGGAGGCGGAGCGCCTAGAGGAGGTGAATTCACAGGTGGAGGAGTTGGCAGATATTTGCAGAAAGATGGAAGAAGGTTTGGTACCTCTACAGCAACAAATCAGAGAGGTGTTTCATAGGGTCGTGAGGAGCAGATCAGAATTTCTTGATGTAATGGACCAAGCTGGGAAATTATCTGCGCCCACTGTATAA 1185 0.519 MPATEYQGSFLGRISIRRNQVMTMEGTNDQEVEDLELFQKHVSDRFAELFSPTSEDSTADALLSIGWLRKLLDTFLCCEAEFKAVLIMDRDPTHISKPPLDRLIPELLDRVVKALDICNALCLGVESVRNVQKLAEIAVSALEQRTIGDGQARRAKKALDSLVTATTAEEKDGSTAKSTERAWSFGRRGATSAPVNKERVSGQFRWLSCSMAKNWSAAKQIHAMSYNLVAPRGAESSGLASPIYIMSTIFVLVMWTLIAAIPCQERTGLGTHFPVPRQLVWAQPMIGLQEKIAEEWKKKEKKGSAGLLDEIQRLEKIGQSLIDFTDSFQFPVEAERLEEVNSQVEELADICRKMEEGLVPLQQQIREVFHRVVRSRSEFLDVMDQAGKLSAPTV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0701 394 PANTHER BPS1-LIKE PROTEIN 14 382 - -
Lele52g0701 394 Pfam Protein ROH1-like 1 383 IPR008511 -
Lele52g0701 394 Coils Coil 337 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0701 Lele-ChrLele52 4419028 4420212 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0701 52 4419028 4420212 Lele52g0701 52 4419028 4420212 ECH
Lele49g0677 49 4113355 4114752 Lele52g0701 52 4419028 4420212 hybridization
Lele50g0709 50 4369091 4370212 Lele52g0701 52 4419028 4420212 hybridization