Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0677 ATGAGATCCTACGTCTCAGGGATGTGGCCTGAGTCAATCCCAAAACTACGCGTTCCCTTACATTGCCTCCGACGGATTAGCTCCGTCTACTTCTTCACTTCCTTCCTTCCTCATTGCTTTATCCTCTTCTTCAACTTTCTAAACTCTCTCTCTCTCCCTCTCTCTCAATCTATCTCCCAGTTGATTAATCGAGAAAGGAAAAGCCAAACAAATATGCCTGCAACAGAATATCAAGGCTCTTTTCTGGGCCGAATAAGTATCCGTCGGAACCAAGTGATGGCCATGGAAGGTACCCATGACCAAGAAGTGGAAGACCTCGAGCTTTTCCAGAAACACGTCAGCGATCGATTCGCTGATCTCTTCTCGCTGTCTTCTGAAGATTCCACCGGCGATGCCCTCCTTTCCATCGGCTGGCTTAGGAAGCTTCTCGACACGTTTCTCTGCTGCGAAGCCGAATTCAAGGCCGTTCTCATAATGGACCGTGATCCTACTCATATCTCCAAGCCTCCTCTCGACCGTCTCATCCCCGAGCTCCTCGACCGGGTTGTCAAAGCTCTCGATATTTGTAATGCGCTCTGTCTCGGCGTCGAGTCCGTCCGGAACGTTCAGAAACTCGCTGAAATAGCCGTCTCTGCTCTGGAACAGAGGCCAATTGGTGATGGCCAGGTTCGACGCGCCAAGAAGGCATTACACTCCATGATCACGGCGATGACGGCGGAGGATAAGGACGGCAGCACCTCCAAGTCGACCGAGAGAACCTGGTCTTTTGGAAGGAGAGGTGCTACCAGCGCTCCGGTGAACAAAGAGCGTGTCTCGGGGCAATTCCGATCTCTATCGTGCAGCATGGCGAAGAATTGGTCTGCCGCCAAACAGATCCACGCCATGTCCTACAATCTGGTGGCACCGCGAGGCGCTGAATCTTCTGGTTTGGCTTCTCCTATCTATGTAATGAGCACGATATTTGTGTTGGTGATGTGGACTCTTATCTCGGCTATCCCGTGTCAAGAGAGAACCGGGTTGGGGGCTCATTTTCCGGTGCCGAGGCAATTGGTTTGGGCTCAACCCATGATAGGGTTGCAGGAGAAGATAGCAGAAGAGTGGAAGAAGAAGGAGAAGAAAGGCTCTGCGGGACTATTGGAGGAGATGCAGAGGCTGGAGAAGATCGGCCAATACTTGATTGATTTCACCGATTCGTTCCAGTTTCCGGTGGAGGCAGAGCGCCTAGAGGAGGTGAATTCACAGGTGGAAGAGTTGGCAGATATTTGCAGAAAGATGGAAGAAGGTCTGGTACCTCTACAGCAGCAAATCAGAGAAGTGTTTCATAGGATTGTGAGGAGCAGATCAGAGTTTCTTGATGTCTTGGACCAAGCTGGCAAATTATCTGCGCCCACTGTGTAA 1398 0.51 MRSYVSGMWPESIPKLRVPLHCLRRISSVYFFTSFLPHCFILFFNFLNSLSLPLSQSISQLINRERKSQTNMPATEYQGSFLGRISIRRNQVMAMEGTHDQEVEDLELFQKHVSDRFADLFSLSSEDSTGDALLSIGWLRKLLDTFLCCEAEFKAVLIMDRDPTHISKPPLDRLIPELLDRVVKALDICNALCLGVESVRNVQKLAEIAVSALEQRPIGDGQVRRAKKALHSMITAMTAEDKDGSTSKSTERTWSFGRRGATSAPVNKERVSGQFRSLSCSMAKNWSAAKQIHAMSYNLVAPRGAESSGLASPIYVMSTIFVLVMWTLISAIPCQERTGLGAHFPVPRQLVWAQPMIGLQEKIAEEWKKKEKKGSAGLLEEMQRLEKIGQYLIDFTDSFQFPVEAERLEEVNSQVEELADICRKMEEGLVPLQQQIREVFHRIVRSRSEFLDVLDQAGKLSAPTV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0677 465 PANTHER BPS1-LIKE PROTEIN 85 454 - -
Lele49g0677 465 Coils Coil 408 428 - -
Lele49g0677 465 Pfam Protein ROH1-like 72 454 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0677 Lele-ChrLele49 4113355 4114752 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0677 49 4113355 4114752 Lele49g0677 49 4113355 4114752 ECH
Lele49g0677 49 4113355 4114752 Lele51g0696 51 4204174 4205358 hybridization
Lele49g0677 49 4113355 4114752 Lele52g0701 52 4419028 4420212 hybridization