Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0709 ATGACCATGGAAGGTACCCATGACCAAGAAGTAGAAGACCTAGAGCTTTTCCAGAAACACGTCAGTGACCGATTCGCCGAACTCTTCTCGCCGTCTTCCGAAGATTCCACCGCCGATGCCCTTCTTTCCATCGGCTGGCTTAGGAAGCTTCTCGACACGTTTCTCTGCTGCGAGGCCGAATTCAAGGCCGTTCTCATAATGGACCGTGATCCTACTCATATCTCCAAGCCTCCTCTCGACCGTCTCATCCCCGAGCTCCTCGACCGGGTTGTCAAGGCTCTCGATATTTGTAATGCGCTCTGTCTAGGCGTCGAGTCCGTCCGGAACGTTCAGAAGCTCGCTGAGATAGCCGTCTCTGCTCTGGAACAGAGGCCAATTGGTGATGGCCAGGCTCGACGGGCCAAGAAGGCATTACACTCCCTGGTCACGGCGATGACTGCGGAGGATAAGGACGGCAGCACAGCCAAGTCCACCGAGAGAGCCTGGTCTTTTGGAAGGAGGGGTGCTACCAGCGTTCCGCTGAACAAAGAGCGTGCCTCAGGGCAATTCCGATGGCTTTCGTGCAGCATGGCGAAGAATTGGTCTGCTGCCAAACAAATCCACGCCATGTCCTACAATCTGGTGTCACCGCGAGGAGCTGAATCTTCTGGTTTGGCTTCTCCTATCTATGTAATGAGCACGATATTTGTGTTGGTGATGTGGACTCTTATCGCGGCTATTCCATGTCAAGAGAGAACCGGGTTGGGGACTCATTTTCCGGTGCCGAGGCAATTGGTTTGGGCTCAACCCATGATAGGGTTGCAGGAGAAGATATCAGAAGCATGGAAGAAGAAGGAGAAGAAAGGATCTGCTGGACTATTGGATGAGATTCAGAGGTTGGAGAAGATAGGCCAATCCTTGATCGATTTCACTGATGCGTTCCAGTTTCCGGTGGAGGCGGAGAGCCTAGAGGAGGTGAATTCACAGGTGGAAGAGTTGGCAGATATTTGCAGAAAGATGGAAGAAGGTTTGGTACCTCTACAGCAACAAATCAGAGAGGTGTTTCATAGGGTCGTGAGGAGCAGATCAGAGTTTCTTGATGTAATGGACCAAGCTGGGAAATTATCTGCGCCCACTGTATAA 1122 0.5187 MTMEGTHDQEVEDLELFQKHVSDRFAELFSPSSEDSTADALLSIGWLRKLLDTFLCCEAEFKAVLIMDRDPTHISKPPLDRLIPELLDRVVKALDICNALCLGVESVRNVQKLAEIAVSALEQRPIGDGQARRAKKALHSLVTAMTAEDKDGSTAKSTERAWSFGRRGATSVPLNKERASGQFRWLSCSMAKNWSAAKQIHAMSYNLVSPRGAESSGLASPIYVMSTIFVLVMWTLIAAIPCQERTGLGTHFPVPRQLVWAQPMIGLQEKISEAWKKKEKKGSAGLLDEIQRLEKIGQSLIDFTDAFQFPVEAESLEEVNSQVEELADICRKMEEGLVPLQQQIREVFHRVVRSRSEFLDVMDQAGKLSAPTV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0709 373 PANTHER BPS1-LIKE PROTEIN 10 361 - -
Lele50g0709 373 Coils Coil 316 336 - -
Lele50g0709 373 Pfam Protein ROH1-like 2 362 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0709 Lele-ChrLele50 4369091 4370212 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0709 50 4369091 4370212 Lele50g0709 50 4369091 4370212 ECH
Lele50g0709 50 4369091 4370212 Lele51g0696 51 4204174 4205358 hybridization
Lele50g0709 50 4369091 4370212 Lele52g0701 52 4419028 4420212 hybridization