Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0675 ATGGCGCGGTTGGTTCTGCCATCGAAGACTCTGGCTTTCTCGAGGAAGAGTTTAATGGGCTTCATCTCCACTGCTCCTCTTCAGGTAACTAGCCGTGTTCATTATTTGGAGAATACAGCAAAGAATAGCATCGTATTTAGGCGTTTCCTTGCTTCACAGGTCATTTTCCGACAGAGGTGTTGCCCATTTCACCCTTCGTTTTCTTCAAGAGTTAAGCAAGTGAACCGGAGGCTAGTTTGTTCAGTTGCCACAGACTTGCCAAAACAAGTTGAAGAACCTAACATGGAGACTCCGAGAGAAATATTCTTGAAGGACTATAAGATGCCTGATTACTACTTTGACACAGTGGATCTGAGATTTTCCTTGGGTGAGGAGAGCTCAATAGTTAGCTCAAAAATTACTGTGTTTCCTCGCATTGAAGGCTCTTCTGCCCCACTTGTTTTGGATGGACAGGACTTCAAATTGATTTCAGTTCAGCTGAATGGCAAAGTACTGAAGGAGGATGATTACCATTTGGATGCACGACATCTAACCATCCTGTCACCTCCTAGTGGCAAATTTGTTCTAGAAATCATAAATGAGATCTACCCACAGAAGAACACGTCATTAGAGGGACTCTACAAGTCTTCTGGAAATTTCTGCACTCAATGTGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGGCCTGATATAATGGCAAAATATACATGTCACATTGAGGCAGATAAATCATTGTACCCGGTTTTGTTGTCTAATGGAAATCTGATTGAGCAAGGTGACTTGGAGAATGGAAAGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAGCCTTCCTATTTGTTTGCTTTGGTTGCTGGGCAGTTACAGAGCAGAGATGACACATTTATTACTCGCTCAGGACGCAAAGTATCTCTAAGGATCTGGACCCCTGCTGAGGATGTACCCAAGACTGCACATGCAATGTATTCTCTAAAGGCAGCTATGCAGTGGGATGAAGATGTTTTTGGTCTTGAATATGACCTGGATCTCTTCAATATTGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAACTCCAAGCTTGTTTTAGCATCTCCAGAAACTGCTACTGATGCAGATTATTCTGCAATATTGGGAGTTATTGGCCATGAGTACTTCCACAACTGGACAGGCAACAGAGTGACTTGTCGTGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCATCTAACATGGGAAGCCGCACTGTTAAACGAATTGCTGATGTTTCAAGACTTCGAAATTATCAATTTCCACAGGATGCTGGGCCCATGGCTCATCCGGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGATATATTGGTCTATGAGAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTGTTGGGAAATCAGGGATTTCGAAAAGGCATGGGCTTATATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTTTGCTGCAATGCGAGATGCAAACGATGCAGATTTTGCAAATTTCTTACGCTGGTACTCACAAGCTGGAACCCCTGTTATCAGAGTGAATTCCTCTTATAATCCCGAAGCACATACTTTTTCTTTAAAAATTAGTCAAGAGATTCCATCAACTCCTGGACAACCAGTTAAGGAACCCATGTTCATTCCTTTGGCAGTAGGTTTGCTTGATTCAACGGGCAAGGACATTCCTCTTTCAACTATATATCACGATGGAACTTTGCAATCTGTTTCAAGAGATGGTCAACCTGTCTCCACCACAGTTCTTCGGCTCACCAAGAAAGAAGAGGAATTAGTATTCTCAGATGTATTTGAGAGGCCTGTCCCATCTCTATTACGGGGATACAGTGCTCCAGTTCGTCTTGAATCAGATCTCACTGACAGTGACCTGTTTTTCCTACTGGCTAATGATTCAGATGAATTTAACCGTTGGGAGGCTGGGCAAATTCTGGCTCGTAAGCTGATGCTCAACTTGGTGGATGATTTCCAACACAACAAACCATTAGTTCTGAATAAAAAATTTGTGGATGGTTTCAAGCGCATTCTATCTGACTCGAGCGTGGACAAAGAATTTGTTGCGAAGGCTGTAACTTTGCCTGGTGAGGGAGAAGTAATGGACATGATGGAGATTGCAGATCCTGATGCTGTTCACGCTGTTCGAACTTTTATTAGGAAACAGCTTGCAAGTGAATTGAGGGCAGAATTCCTCAGCACACTAAAAGATAACAGGAGCTCGGAAGAGTATGTGTTCAATCATCCTAACATGGCCAGACGTGCTTTGAAGAATGTTGCTCTTGCTTATCTTGCCTGCCTGGAGGATCCAGAGATCACCAACATTGTGCTGCATGAGTATAATTCTGCCACAAATATGACTGAGCAATTTGCAGCTTTGGCAGCCATAGCTCAGAACCCTGGTAAAACTCGTGATGATGTTCTTGCTGACTTCTATGGCAAGTGGCAGCATGACTTCTTGGTGGTGAATAAATGGTTTGCGCTTCAAGCAATGTCTGACATTCCTGGAAATGTTGAGAATGTGAAGCAACTGTTGAATCATCCAGCATTTGACCTGCGCAATCCAAACAAAGTGTACTCACTCATTGGAGGTTTCTGCGGATCTCCGGTTAACTTCCACGCAAAGGATGGGTCGGGCTACAAGTTTTTGGGAGATATTGTGCTGCAACTTGACAAACTCAATCCTCAAGTTGCCTCACGAATGGTGTCGGCCTTTTCTAGATGGAAGCGTTATGACGAAAACAGACAAAAGCTTGCCAAGGCCCAGCTGGAGCTAATTATGTCAGCTAATGGACTGTCAGAGAATGTGTATGAGATTGCGTCCAAAAGCTTAGCTGTTTAG 2949 0.4323 MARLVLPSKTLAFSRKSLMGFISTAPLQVTSRVHYLENTAKNSIVFRRFLASQVIFRQRCCPFHPSFSSRVKQVNRRLVCSVATDLPKQVEEPNMETPREIFLKDYKMPDYYFDTVDLRFSLGEESSIVSSKITVFPRIEGSSAPLVLDGQDFKLISVQLNGKVLKEDDYHLDARHLTILSPPSGKFVLEIINEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCHIEADKSLYPVLLSNGNLIEQGDLENGKHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITRSGRKVSLRIWTPAEDVPKTAHAMYSLKAAMQWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYSAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSNMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTDILVYEKGAEVVRMYKTLLGNQGFRKGMGLYFKRHDGQAVTCEDFFAAMRDANDADFANFLRWYSQAGTPVIRVNSSYNPEAHTFSLKISQEIPSTPGQPVKEPMFIPLAVGLLDSTGKDIPLSTIYHDGTLQSVSRDGQPVSTTVLRLTKKEEELVFSDVFERPVPSLLRGYSAPVRLESDLTDSDLFFLLANDSDEFNRWEAGQILARKLMLNLVDDFQHNKPLVLNKKFVDGFKRILSDSSVDKEFVAKAVTLPGEGEVMDMMEIADPDAVHAVRTFIRKQLASELRAEFLSTLKDNRSSEEYVFNHPNMARRALKNVALAYLACLEDPEITNIVLHEYNSATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDIPGNVENVKQLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGDIVLQLDKLNPQVASRMVSAFSRWKRYDENRQKLAKAQLELIMSANGLSENVYEIASKSLAV 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0675 982 Pfam Peptidase family M1 domain 325 536 IPR014782 GO:0008237|GO:0008270
Lele52g0675 982 FunFam Aminopeptidase N 377 541 - -
Lele52g0675 982 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 98 289 IPR042097 -
Lele52g0675 982 Gene3D tricorn interacting facor f3 domain 108 291 IPR042097 -
Lele52g0675 982 Pfam Domain of unknown function (DUF3458) Ig-like fold 542 655 IPR035414 -
Lele52g0675 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 273 288 IPR001930 GO:0006508
Lele52g0675 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 391 406 IPR001930 GO:0006508
Lele52g0675 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 355 365 IPR001930 GO:0006508
Lele52g0675 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 410 422 IPR001930 GO:0006508
Lele52g0675 982 Gene3D - 542 655 IPR038438 -
Lele52g0675 982 Pfam Peptidase M1 N-terminal domain 118 283 IPR045357 -
Lele52g0675 982 Gene3D - 292 376 - -
Lele52g0675 982 FunFam Puromycin-sensitive aminopeptidase 657 981 - -
Lele52g0675 982 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 301 548 - -
Lele52g0675 982 CDD M1_APN 105 539 - -
Lele52g0675 982 Pfam Domain of unknown function (DUF3458_C) ARM repeats 659 981 IPR024601 -
Lele52g0675 982 Gene3D Neutral Protease Domain 2 377 541 IPR027268 -
Lele52g0675 982 FunFam Putative aminopeptidase N 293 376 - -
Lele52g0675 982 Gene3D - 657 981 IPR037144 -
Lele52g0675 982 FunFam Aminopeptidase N 542 656 - -
Lele52g0675 982 TIGRFAM pepN_proteo: aminopeptidase N 105 980 IPR012779 GO:0008270
Lele52g0675 982 Coils Coil 975 982 - -
Lele52g0675 982 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 94 981 IPR012779 GO:0008270
Lele52g0675 982 FunFam Aminopeptidase N 108 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0675 Lele-ChrLele52 4270473 4278140 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0675 52 4270473 4278140 Lele52g0675 52 4270473 4278140 ECH
Lele49g0654 49 3958455 3966067 Lele52g0675 52 4270473 4278140 hybridization
Lele50g0685 50 4227426 4230758 Lele52g0675 52 4270473 4278140 hybridization