Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0685 ATGGCGCGGTTGGTTCTGCCATCGAAGACTCTGGCTTTCTCGAGGAAGAGTTTACTGGGCTTCATCTCCACTGCTCCTCTTCCTGGAGTTAATGGTTCGGTTCTTCAGGTCATTTTCCGACAGAGTTGTGGCCCATTTCACCCTTCGTTTTCTTCAGAGGATGATTACCATTTGGATGCACGACGTCTAACCATCTTGTCACCTCCTAGTGGCAAATTTGTTCTAGAAATCAGAAACGAGATCTACCCACAGAAGAACACGTCATTAGAGGGACTCTACAGGTCTTCTGGAAATTTCTGCACTCACTGTGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGGCCTGATATAATGGCTAAATATACATGTTACATTGAGGCAGATAAATCATTGTACCCGGTGTTGTTGTCTAACGGAAATCTGAGTGAGAAAGGTGACTTGGAGAATGGAAAGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAGCCTTCCTATTTGTTTGCTTTGGTTGCTGGGCAGTTACAGAGCACAGATGACACATTTATCGCTCGCTCAGGACGCAAAGTATCTCTAAGGATCTGGACCCCTGCTCAGGATGTACCCAAGACCGCACATGCAATGTATTCTTTAAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGTCTTGAATATGACTTGGATCTCTTTAATATTGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAATTCCCAGCGTGTTTTAGCATCTCCAGAAACTGCTACTGATGCAGATTATTCTGCAATATTGGGAGTTATTGGCCATGAGTACCTCCACAACTGGACAGGCAACAGGTAG 873 0.4387 MARLVLPSKTLAFSRKSLLGFISTAPLPGVNGSVLQVIFRQSCGPFHPSFSSEDDYHLDARRLTILSPPSGKFVLEIRNEIYPQKNTSLEGLYRSSGNFCTHCEAEGFRKITFYQDRPDIMAKYTCYIEADKSLYPVLLSNGNLSEKGDLENGKHYAVWEDPFKKPSYLFALVAGQLQSTDDTFIARSGRKVSLRIWTPAQDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSQRVLASPETATDADYSAILGVIGHEYLHNWTGNR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0685 290 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 47 175 IPR042097 -
Lele50g0685 290 Gene3D tricorn interacting facor f3 domain 30 177 IPR042097 -
Lele50g0685 290 Pfam Peptidase family M1 domain 211 289 IPR014782 GO:0008237|GO:0008270
Lele50g0685 290 Gene3D - 178 262 - -
Lele50g0685 290 FunFam Putative aminopeptidase N 179 262 - -
Lele50g0685 290 Pfam Peptidase M1 N-terminal domain 76 169 IPR045357 -
Lele50g0685 290 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 52 290 IPR012779 GO:0008270
Lele50g0685 290 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 188 290 - -
Lele50g0685 290 PRINTS Membrane alanyl dipeptidase (M1) family signature 109 124 IPR001930 GO:0006508
Lele50g0685 290 PRINTS Membrane alanyl dipeptidase (M1) family signature 241 251 IPR001930 GO:0006508
Lele50g0685 290 PRINTS Membrane alanyl dipeptidase (M1) family signature 159 174 IPR001930 GO:0006508
Lele50g0685 290 PRINTS Membrane alanyl dipeptidase (M1) family signature 277 290 IPR001930 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0685 Lele-ChrLele50 4227426 4230758 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0685 50 4227426 4230758 Lele50g0685 50 4227426 4230758 ECH
Lele50g0685 50 4227426 4230758 Lele51g0671 51 4066027 4073739 hybridization
Lele50g0685 50 4227426 4230758 Lele52g0675 52 4270473 4278140 hybridization