Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0654 ATGGCGCGATACCAGGCTTTCAACCTTTGGTTCCATTCTGAGCTGTTTGAAATGGTTCTTAGCTTCCGGGAGTTGATGCTTAAGGTAATTGGCAGTGTTAACTATTTTGAGAATACAGCAAAGAATAGCATCGTGTTGAGGCGTTTCCTTGCTTCACAGGCCATTTTCCGACAGAGGTGTTGTCGACACCCTTCATTTTCTTCAGAGGATGATTACCAATTGGGTGCACGGCGTCTAACCATCCACTCACCTCCTAGTGGTAAATTTGTTCTAGAAATCGTAAATGAGATCTACCCACATAAGAACACATCATTAGAGGGACTCTACAAGTCATCTGGAAATTTCTGCACTCAATGTGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGACCTGATGTAATGGCAAAATATACATGTCACATTGAGGCAGATAAATCATTGTACCCGGTGTTGTTGTCTAATGGAAATCTGATTAAGCAAGGTGACTTGGAGAATGGAAAACATTATGCTGTTTGGGAGGACCCTTTCAAGAAGCCTTCCTATTTGTTTGCTTTGGTTGCTGGGCAGTTACAGAGCAGAGATGACACATTCATCACGCGCTCTGGACGCAAGGTATCTCTAAGGATCTGGACCCCTGCTGAGGATGTACCAAAGACTGCACATGCAATGTATTCTCTAAAGGCAGCTATGAAGTGGGATGAAGATGTTTTTGGTCTTGAGTATGACCTGGATCTCTTCAATATTGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAACTCCAAGCTTGTTTTAGCATCTCCAGAAACTGCTACTGATGCAGATTATTCTGCAATATTGGGAGTTATTGGCCATGAGGAATTTTCATCTGACATGGGAAGCCGCACTGTTAAACGAATTGCTGATGTTTCAAGACTTCGAAATTATCAATTTCCACAGGATGCTGGGCCCATGGCTCATCCAGTGCGACCGCACTCTTACATCAAGATGGACAACTTCTACACAGGCAAGTCTATGAGAAGGTTTGACATTCACTACATTTTCTCAATCCTTCCTTGTCTCTGCCTGCTATTTGTTCTAAATATTTCATATATCAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTGTTGGGAAGTCAGGGATTTCGAAAAGTACTCACAAGCTGGAACCCCTGTTATCAAAGTGAATTCCTCTTATAATACTGAAGCACATACTTTTTCTTTAAAAATTAGCCAAGAGATTCCACCAACTCCTGGACAACCAGTTAAGGAATCCATGTTCATTCCTTTGGCAGTAGGTTTGCTTGATTCAACGGGCAAGGACATTCCTCTTTCAACTATATATTACGATGGAACTTTGCAGTCTGTTTCAAGAGATGGTCAACCTGTCTCCACCACAGTCCTTCGGCTCACCAAGAAAGAAGAGGAATTTGTGTTCTCAGATGTATTTGAGAGGCCTGTCCCATCTCTATTACGGGGATACAGTGCTCCAGTCCGTCTTGAATCAGATCTCACTGACAGTGACCTGCTTTTCCTACTGGCTAATGATTCAGATGAATTTAACCGTTGGGAGGCTGGGCAAATTCTGTCTCGTAAGCTGATGCTCAACTTGGTGGATGATTTCCAACATAACAAACCGTTAGCTCTGAATAACAAATTTGTGGGTGGTTTCAAGAGCATTCTATCTGACTCAAGCCTGGACAAAGAATTTGTTGCAAAGGCTATAACTTTGCCTGGTGAGGGAGAAGTAATGGACATGATGGCGGTTGCAGATCCTGATGCTGTTCACGCTGTTCGGACTTTTATCAGGAAACAGCTTGCAAGTGAATTGAGGGCAGAATTCCTCAGCACACTAAAAGATAACAGGAGCTCCGAAGAGTATGTGTTCAACCATCCTAACATGGCCAGACGTGCTTTGAAGAATGTTGCGCTTGCATATCTTGCCTCCCTGGAGGATCCAGAGATCATCGACATTGTGCTGCATGAGTATAATTCTGCCACAAATATGACTGAGCAATTTGCAGCTTTGGCAGCCATAGCCCAGAACCCTGGTAAGATGCGTGATGATGTTCTTGCTGACTTCTATGGCAAGTGGCAGCATGACTTCTTGGTGGTCAATAAATGGTTTGCGCTTCAAGCAATGTCTGACATTCATGGAAATGTTGAGAATATGAAGCAACTGTTAAATCATCCAGCATTTGACCTGCGCAATCCAAACAAAGTGTATTCACTCATTGGAGGTTTCTGCGGATCTCCAGTGAACTTCCACGCAAAGGATGGATCGGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTTGACAAAATCAATCCTCAAGTTGCCTCACGAATGGTGTCGGCCTTCTCTAGATGGAAGCGTTATGATGAAAACAGACAAAAGCTTGCCAAGGCCCAGCTGGAGCTAATTATGTCAGCTAATGGACTGTCAGAGAATGTGTATGAGATTGCCTCCAAAAGCTTAGCTGTTTAA 2526 0.4311 MARYQAFNLWFHSELFEMVLSFRELMLKVIGSVNYFENTAKNSIVLRRFLASQAIFRQRCCRHPSFSSEDDYQLGARRLTIHSPPSGKFVLEIVNEIYPHKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDVMAKYTCHIEADKSLYPVLLSNGNLIKQGDLENGKHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITRSGRKVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYSAILGVIGHEEFSSDMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKSMRRFDIHYIFSILPCLCLLFVLNISYIRGLKLSECTKPCWEVRDFEKYSQAGTPVIKVNSSYNTEAHTFSLKISQEIPPTPGQPVKESMFIPLAVGLLDSTGKDIPLSTIYYDGTLQSVSRDGQPVSTTVLRLTKKEEEFVFSDVFERPVPSLLRGYSAPVRLESDLTDSDLLFLLANDSDEFNRWEAGQILSRKLMLNLVDDFQHNKPLALNNKFVGGFKSILSDSSLDKEFVAKAITLPGEGEVMDMMAVADPDAVHAVRTFIRKQLASELRAEFLSTLKDNRSSEEYVFNHPNMARRALKNVALAYLASLEDPEIIDIVLHEYNSATNMTEQFAALAAIAQNPGKMRDDVLADFYGKWQHDFLVVNKWFALQAMSDIHGNVENMKQLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSAFSRWKRYDENRQKLAKAQLELIMSANGLSENVYEIASKSLAV 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0654 841 FunFam Puromycin-sensitive aminopeptidase 516 840 - -
Lele49g0654 841 FunFam Putative aminopeptidase N 195 278 - -
Lele49g0654 841 Pfam Domain of unknown function (DUF3458_C) ARM repeats 518 840 IPR024601 -
Lele49g0654 841 Gene3D - 194 278 - -
Lele49g0654 841 Pfam Peptidase M1 N-terminal domain 96 185 IPR045357 -
Lele49g0654 841 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 66 191 IPR042097 -
Lele49g0654 841 Pfam Domain of unknown function (DUF3458) Ig-like fold 401 514 IPR035414 -
Lele49g0654 841 Gene3D tricorn interacting facor f3 domain 11 193 IPR042097 -
Lele49g0654 841 FunFam Aminopeptidase N 401 515 - -
Lele49g0654 841 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 203 347 - -
Lele49g0654 841 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 297 347 IPR012779 GO:0008270
Lele49g0654 841 Pfam Peptidase family M1 domain 227 299 IPR014782 GO:0008237|GO:0008270
Lele49g0654 841 Gene3D - 401 514 IPR038438 -
Lele49g0654 841 Gene3D - 516 840 IPR037144 -
Lele49g0654 841 Gene3D Neutral Protease Domain 2 293 360 IPR027268 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0654 Lele-ChrLele49 3958455 3966067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0654 49 3958455 3966067 Lele49g0654 49 3958455 3966067 ECH
Lele49g0654 49 3958455 3966067 Lele51g0671 51 4066027 4073739 hybridization
Lele49g0654 49 3958455 3966067 Lele52g0675 52 4270473 4278140 hybridization