Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0660 ATGCCCCTTATAAAATCCGATTCCCTCTCGAGAAAAAGGCGGAGTTTCTTTTCTTCCTCCGTCTTCCCTGCCACTTCCTTGTTTCGGAGAACGCCAAAATTCTGTTTTGGTATACCAGAAACCTTTGAGAGTACCCTGGTTGTGATTTCACGGACGGGTTCAATGTATTGCACGCGCACTGAGACGACACGATGCAGAGTTGGGAACAATGCACTTTTTGGCACAAGACATAAGTTTGATGCATCCCATGTAAAGAAAACTTGTGTTGGTTTCTCTTCCTTATCATGCTATTATGCAAGGAAGATTCAGATTACTCAGAAAAGGATTTTTACCGGTGTTGGATCTAAACGGGATCGTACAATGATTGTTGCAGCCAGCTCCCCTACAGAAGATGCTGTCGTTGGTACTGAGCCACTTACGAAGAAGGATCTTGTAGAATACCTGGCCTCTGGTTGTAAACCGAAGGAAAAATGGAGAATTGGTACTGAACATGAGAAGTTTGGTTTTGAGTTTGGAAGCCTACGTCCTATGAAGTATGAACAGATAGCAGAGTTGCTCAATGGCATTTCTGAGAGATTCGATTGGGAGAAAGTAATGGAAGGTGATTACATTATTGGACTTAAACAGGGCAAGCAAAGCATATCATTGGAGCCTGGCGGTCAATTTGAGCTTAGTGGTGCCCCACTAGAAACTTTGCATCAGACTTGTGCTGAAGTTAACTCACACCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGAATTGGTTTCCAGCCAAAGTGGGGACTCAAAGACATACCTATAATGCCAAAGGGAAGATATGAAATTATGAGAAATTACATGCCCAAAGTTGGTTCCCTTGGACTTAACATGATGTTCAGAACGTGCACTGTACAGGTCAATCTAGACTTCAGTTCTGAAGCAGATATGATAAGGAAGTTTCGTGCTGGTCTAGCCTTGCAGCCTATAGCAACTGCTCTATTTGCAAATTCACCCTTCACAGAAGGAAAGCCAAATGGTCTTCTCAGTATGAGAAGCCATATATGGACTGATACTGATAAGGACCGCACAGGGATGCTGCCATTTGTTTTTAATGACTCCTTTGGCTTTGAGCAGTATGTTGATTATGCTCTAGATGTTCCGATGTATTTTGCCTATCGGAAAGGGAAATATGTCAACTGTACCGGAATGACCTTCAGGGATTTTATGGAAGGGAAGCTTCCTTGCATTCCTGGTGAATTGCCAACGCTAAATGATTGGGAAAATCACTTGACAACTATATTTCCTGAGGTTAGGCTAAAGAGGTACTTGGAGATGAGAGGCGCTGATGGAGGGCCCTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGCTTATTGTACGATGAGGTTTCTCTACAGAATGTTTTAGATATGACAGCTGATTGGACCCCAGAAGAAAGACAGATGCTAAGGGATAAGGTCCCCAAATACGGTCTAAAGACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAATTTTCGAAAGATGGTCTGGAAAGAAGAGGCTATAAGGAAACTGGTTTCTTGAATGCGGTTGCGGAGGTGGTTAGTACAGGTGTTACACCAGCTGAGAAGCTTTTGGATTTGTATCATGGAAAGTGGGGGCAATCTGTAGATCCTGTATATGAGGAATTGCTATATTGA 1719 0.4293 MPLIKSDSLSRKRRSFFSSSVFPATSLFRRTPKFCFGIPETFESTLVVISRTGSMYCTRTETTRCRVGNNALFGTRHKFDASHVKKTCVGFSSLSCYYARKIQITQKRIFTGVGSKRDRTMIVAASSPTEDAVVGTEPLTKKDLVEYLASGCKPKEKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGISERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPIMPKGRYEIMRNYMPKVGSLGLNMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGLLSMRSHIWTDTDKDRTGMLPFVFNDSFGFEQYVDYALDVPMYFAYRKGKYVNCTGMTFRDFMEGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDMTADWTPEERQMLRDKVPKYGLKTPFRDGLLKHVAEDVLKFSKDGLERRGYKETGFLNAVAEVVSTGVTPAEKLLDLYHGKWGQSVDPVYEELLY 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0660 572 FunFam Glutamate--cysteine ligase 124 572 - -
Lele52g0660 572 SUPERFAMILY Glutamine synthetase/guanido kinase 150 570 IPR014746 GO:0003824
Lele52g0660 572 Pfam Glutamate-cysteine ligase family 2(GCS2) 191 482 IPR006336 GO:0004357|GO:0042398
Lele52g0660 572 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 138 572 IPR011556 GO:0004357|GO:0006750
Lele52g0660 572 Gene3D - 124 572 - -
Lele52g0660 572 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 107 572 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0660 Lele-ChrLele52 4166346 4172983 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0660 52 4166346 4172983 Lele52g0660 52 4166346 4172983 ECH
Lele49g0640 49 3856156 3862869 Lele52g0660 52 4166346 4172983 hybridization
Lele50g0668 50 4095074 4103923 Lele52g0660 52 4166346 4172983 hybridization