Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0668 ATGAAGGAGTTTCTTTTGTTCCTCCGTCTTCCCTGCCACTTCCTTGTTTCGGAGAACGCCAAAGAGAGTACCCTGGTTGTGATTTCACGGACGGGTTCAATGTATTGCACGCGCACTGAGACGACACGATGCAGAGTTGGGAACAATGCACTTTTTGGCACAAGACATAAGTTTGATGCATCCCATGTAAAGAAAACTTGTGTTGGTTTCTCTTCCTTATCATGCGATTATGCAAGGAAGATTCAGATTACTCAGAAAAGGATTTTTACCGGTGTTGGATCTAAACGGGATCGTGCTATGATTGTTGCAGCCAGCCCCCCTACAGAAGATGCTGTCGTTAGTACTGAGCCACTTACGAAGAAGGATCTTGTAGAGTACCTTGCCTCTGGTTGTAAACCGAAGGAAAAATGGAGAATTGGTACTGAACATGAGAAGTTTGGTTTTGAGTTTGGAAGCCTGCGTCCTATGAAGTATGAACAGATAGCAGAGTTGCTCAATGGCATTTCTGAGAGATTCGATTGGGAGAAAGTAATGGAAGGTGATTACATTATTGGACTTAAACAGGGTAAGCAAAGCATATCATTGGAGCCTGGCGGTCAATTTGAGCTTAGTGGTGCCCCACTAGAAACTTTGCATCAGACTTGTGCTGAAGTTAACTCACACCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGAATTGGTTTCCAGCCAAAGTGGGGACTCAAAGACATACCTATAATGCCAAAGGGAAGATATGAAATAATGAGAAATTACATGCCCAAAGTTGGTTCCCTGGGACTTAACATGATGTTCAGAACGTGCACTGTACAGGTCAATCTAGACTTCAGTTCAGAAGCAGATATGATAAGGAAGTTTCGTGCTGGTCTAGCCTTGCAGCCTATAGCAACTGCTCTATTTGCAAATTCACCCTTCACAGAAGGAAAGCCAAATGGTCTTCTCAGTATGAGAAGCCATATATGGACTGATACTGATAACGACCGCACAGGGATGCTGCGATTTGTTTTTGATGACTCCTTTGGCTTTGAGCAGTATGTTGATTATGCTCTAGATGTTCCGATGTATTTTGCCTATCGGAAAGGGAAATATGTCAACTGTACCGGAATGACCTTCAGGGATTTTATGGAAGGTAAGCTTCCTTGCATTCCTGGTGAATTGCCAACGCTAAATGATTGGGAAAATCATTTGACAACTATATTTCCTGAGGTTAGGCTAAAGAGGTACTTGGAGATGAGAGGTGCTGATGGAGGGCCCTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGCTTATTGTACGATGAGGTTTCTCTACAGAATGTTTTAGATATGACAGCTGATTGGACCCCAGAAGAAAGACAGATGCTAAGGGATAAGGTCCCCAAATACGGTCTAAAGACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAATTTTCGAAAGATGGTCTGGAAAGAAGAGGCTATAAGGAAACTGGTTTCTTGAATGCGGTTGCAGAGGTGGTTAGTACAGGTGTTACACCAGCTGAGAAGCTTTTGGATTTGTATCATGGAAAGTGGGGGCAATATGTAGATCCTGTATATGAGGAATTGCTATATTGA 1656 0.4293 MKEFLLFLRLPCHFLVSENAKESTLVVISRTGSMYCTRTETTRCRVGNNALFGTRHKFDASHVKKTCVGFSSLSCDYARKIQITQKRIFTGVGSKRDRAMIVAASPPTEDAVVSTEPLTKKDLVEYLASGCKPKEKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGISERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPIMPKGRYEIMRNYMPKVGSLGLNMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGLLSMRSHIWTDTDNDRTGMLRFVFDDSFGFEQYVDYALDVPMYFAYRKGKYVNCTGMTFRDFMEGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDMTADWTPEERQMLRDKVPKYGLKTPFRDGLLKHVAEDVLKFSKDGLERRGYKETGFLNAVAEVVSTGVTPAEKLLDLYHGKWGQYVDPVYEELLY 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0668 551 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 86 551 IPR035434 GO:0004357|GO:0006750
Lele50g0668 551 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 117 551 IPR011556 GO:0004357|GO:0006750
Lele50g0668 551 Pfam Glutamate-cysteine ligase family 2(GCS2) 170 461 IPR006336 GO:0004357|GO:0042398
Lele50g0668 551 Coils Coil 551 551 - -
Lele50g0668 551 FunFam Glutamate--cysteine ligase 103 551 - -
Lele50g0668 551 Gene3D - 103 551 - -
Lele50g0668 551 SUPERFAMILY Glutamine synthetase/guanido kinase 129 549 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0668 Lele-ChrLele50 4095074 4103923 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0668 50 4095074 4103923 Lele50g0668 50 4095074 4103923 ECH
Lele50g0668 50 4095074 4103923 Lele51g0657 51 3959517 3965347 hybridization
Lele50g0668 50 4095074 4103923 Lele52g0660 52 4166346 4172983 hybridization