Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0640 ATGGTTGTGATTTCACGGACAGGTTCATTGTATTGCACGCGCACTGAGACGACACGATGCAGATTTGGGAACAATGCCCTTTTTGGCACAAGACATAAGTTTGATGCTTTCCATGTAAAGAAAACTTGTGTTGGTCTCTCTTCCTTATCATGCAATTCTTCAAGGAAGATTCAGGTCACACAGAAAAGGATGTTTACCGGTGTTAGATCTAAACGGGATCGTACGATGATTGTTGCTGCCAGCCCTCCCACAGAAGATGCTGTCGTTAGTACTGAGCCTCTTACAAAGAAGGATCTTATAGAATACCTTGCCTCCGGTTGTAAACCGAAGGAAAAATGGAGAATTGGTACTGAACATGAGAAGTTTGGTTTTGAGTTTGGAAGCCTACGTCCTATGAAGTATGAACAGATAGCAGAGTTGCTCAATGGCATTTCTGAGAGATTCGATTGGGAGAAAGTAATGGAAGGGGATTACATAATTGGACTTAAGCAGGGCAAGCAAAGCATATCATTGGAGCCTGGTGGTCAATTTGAGCTTAGTGGTGCCCCACTAGAAACTTTGCATCAGACTTGTGCTGAAGTTAACTCACACCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGAATTGGTTTCCAGCCAAAGTGGGCACTTAAAGACATACCTATGATGCCAAAGGGAAGATATGAAATAATGAGAAATTACATGCCCAAAGTTGGTTCCCTTGGACTTGACATGATGTTCAGAACATGCACTGTACAGGTCAATCTAGACTTCAGTTCTGAAGCAGACATGATAAGGAAGTTTCGTGCTGGTCTAGCCTTGCAGCCTATAGCAACAGCTCTATTTGCAAATTCACCTTTCAAAGAAGGAAAGCCAAATGGTCTTCTCAGTATGAGGAGCCATATATGGACTGATACTGATAACGACCGCACAGGAATGCTGCCATTTGTTTTTGATGACTCCTTTGGCTTTGAGCAGTACGTTGATTATGCTCTAGATGTTCCAATGTATTTTGTCTATCGGAAAGGGAAATATGTCAACTGTACTGGAATGACCTTCAGGGATTTTATGGAAGGGAAGCTTCCTTGCATTCCTGGTGAATTGCCAACACTAAATGATTGGGAAAATCACTTGACAACTATATTTCCTGAGGTTAGACTAAAGAGGTACTTGGAGATGAGAGGGGCTGATGGAGGGCCCTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTGGGTATATTGTACGATGAGGTTTCTCTACAGAATGTTTTAGAGATGACAGCTGATTGGACCCCAGAAGAAAGACAGATGCTAAGGGATAAGGTCCCAAAATATGGTCTAAAGACACCATTCCGAGATGGCTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAATTTTCGAAAGATGGTTTGGAAAGAAGAGGCTATAAGGAAACTGGTTTCTTGAATGCGGTTGCAGAGGTGGTTAGTACAGGTGTTACTCCAGCTGAAAAGCTTTTGGATTTGTATCATGAAAAGTGGGGGCAATCTGTAGATCCTGTATATGAGGAATTGCTATATTGA 1584 0.4223 MVVISRTGSLYCTRTETTRCRFGNNALFGTRHKFDAFHVKKTCVGLSSLSCNSSRKIQVTQKRMFTGVRSKRDRTMIVAASPPTEDAVVSTEPLTKKDLIEYLASGCKPKEKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGISERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWALKDIPMMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFKEGKPNGLLSMRSHIWTDTDNDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKGKYVNCTGMTFRDFMEGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEVSLQNVLEMTADWTPEERQMLRDKVPKYGLKTPFRDGLLKHVAEDVLKFSKDGLERRGYKETGFLNAVAEVVSTGVTPAEKLLDLYHEKWGQSVDPVYEELLY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0640 527 Pfam Glutamate-cysteine ligase family 2(GCS2) 146 437 IPR006336 GO:0004357|GO:0042398
Lele49g0640 527 Gene3D - 79 527 - -
Lele49g0640 527 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 93 527 IPR011556 GO:0004357|GO:0006750
Lele49g0640 527 FunFam Glutamate--cysteine ligase 79 527 - -
Lele49g0640 527 PIRSF GCL 77 527 IPR035434 GO:0004357|GO:0006750
Lele49g0640 527 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 54 527 IPR035434 GO:0004357|GO:0006750
Lele49g0640 527 SUPERFAMILY Glutamine synthetase/guanido kinase 105 524 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0640 Lele-ChrLele49 3856156 3862869 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0640 49 3856156 3862869 Lele49g0640 49 3856156 3862869 ECH
Lele49g0640 49 3856156 3862869 Lele51g0657 51 3959517 3965347 hybridization
Lele49g0640 49 3856156 3862869 Lele52g0660 52 4166346 4172983 hybridization