Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0655 ATGTGCACTGTAGAAAAGCTCGGCTCTTTGATTTGGGTTTCCTCTACCTTTTGGGTTCTTCGGCTGCACGCTATGACTACCGAAGCCACTAATCCAAAATCTCTGTTCGATTTTGTTGTCAAGGATGCTAAGGGAAATGATGTTGACCTTTCTACTTACAGTGGAAAAGTCCTGTTGATTGTCAATGTTGCTTCCAAATGTGGCTTAACCAACTCCAATTATACAGAGCTGAATCAATTATATGACAAGTATAAAGATAAAGGTCTGGAGATACTGGGATTTCCATGCAATCAGTTTGGTGCACAAGAACCTGGAAGCAATAATGAAATCGTGGATTTTGTCTGCACTCGCTTCAAATCAGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGTGAGAATGAAGCTCCAGTGTACAAGTTCTTAAAGTCGTGCCAATGGGGAATTATTGGGGACGATATTCAGTGGAACTTCGCCAAGTTTCTAGTTGACAAGAACGGCCAAGCCGTGGGTCGCTATTATCCCACAACTTCTCCTCTCAGCCTTGAGCGGGACATCGAAAAGCTTCTGGGTATTATATGA 582 0.4227 MCTVEKLGSLIWVSSTFWVLRLHAMTTEATNPKSLFDFVVKDAKGNDVDLSTYSGKVLLIVNVASKCGLTNSNYTELNQLYDKYKDKGLEILGFPCNQFGAQEPGSNNEIVDFVCTRFKSEFPIFDKIEVNGENEAPVYKFLKSCQWGIIGDDIQWNFAKFLVDKNGQAVGRYYPTTSPLSLERDIEKLLGII 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0655 193 Gene3D Glutaredoxin 25 191 - -
Lele52g0655 193 ProSitePatterns Glutathione peroxidases active site. 55 70 IPR029759 -
Lele52g0655 193 ProSitePatterns Glutathione peroxidases signature 2. 92 99 IPR029760 -
Lele52g0655 193 FunFam Glutathione peroxidase 26 192 - -
Lele52g0655 193 PRINTS Glutathione peroxidase family signature 154 163 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 PRINTS Glutathione peroxidase family signature 89 105 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 PRINTS Glutathione peroxidase family signature 53 70 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 ProSiteProfiles Glutathione peroxidase profile. 25 193 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 CDD GSH_Peroxidase 34 186 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 ProSiteProfiles Thioredoxin domain profile. 29 191 IPR013766 -
Lele52g0655 193 PANTHER GLUTATHIONE PEROXIDASE 26 190 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 SUPERFAMILY Thioredoxin-like 34 190 IPR036249 -
Lele52g0655 193 PIRSF Glutathion_perox 10 192 IPR000889 GO:0004602|GO:0006979
Lele52g0655 193 Pfam Glutathione peroxidase 35 143 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0655 Lele-ChrLele52 4142363 4144787 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0655 52 4142363 4144787 Lele52g0655 52 4142363 4144787 ECH
Lele49g0634 49 3829578 3830740 Lele52g0655 52 4142363 4144787 hybridization
Lele50g0663 50 4068642 4072210 Lele52g0655 52 4142363 4144787 hybridization