Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0663 ATGAGAGTGAAACTCGGCTCTTTGATTTGGGTTTCCTCTAGCTTTTGGGTTCTTCGGCTGCACGCTATGACTACCGAAGCCACTAATCCAAAATCCCTGTTCGATTTTGTTGTCAAGGATGCTAAGGGAAATGATGTTGACCTTTCTACTTACAGTGGAAAAGTCCTGTTGATTGTCAATGTTGCTTCCAAATGTGGCTTAACCAACTCCAATTATACAGAGCTGAATCAATTATATGACAAGTATAAAGATAAAGGTCTGGAGATACTGGTATTTCCATGCAATCAGTTTGGTGCACAAGAACCTGGAAGCAATAATGAAATCGTGGATTTTGTCTGCACTCGCTTCAAATCAGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGTGAGAATGAAGCTCCAGTGTACAAGTTCTTAAAGTCGTGCCAATGGGGAATTATTGGGGACGATATTCAGTGGAACTTCGCCAAGTTTCTAGTTGACAAGAACGGCCAAGCCGTGGGTCGCTATTATCCCACAACTTCTCCTCTCAGCCTTGAGCGGGACATCGAAAAGCTCCTGGGGCTTCAGGGAACGGGCATATCAGTCGCGAATGCCTAA 603 0.4362 MRVKLGSLIWVSSSFWVLRLHAMTTEATNPKSLFDFVVKDAKGNDVDLSTYSGKVLLIVNVASKCGLTNSNYTELNQLYDKYKDKGLEILVFPCNQFGAQEPGSNNEIVDFVCTRFKSEFPIFDKIEVNGENEAPVYKFLKSCQWGIIGDDIQWNFAKFLVDKNGQAVGRYYPTTSPLSLERDIEKLLGLQGTGISVANA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0663 200 PIRSF Glutathion_perox 8 191 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 PRINTS Glutathione peroxidase family signature 152 161 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 PRINTS Glutathione peroxidase family signature 51 68 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 PRINTS Glutathione peroxidase family signature 87 103 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 SUPERFAMILY Thioredoxin-like 32 188 IPR036249 -
Lele50g0663 200 CDD GSH_Peroxidase 32 184 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 ProSitePatterns Glutathione peroxidases active site. 53 68 IPR029759 -
Lele50g0663 200 PANTHER GLUTATHIONE PEROXIDASE 24 188 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 FunFam Glutathione peroxidase 24 190 - -
Lele50g0663 200 Pfam Glutathione peroxidase 33 141 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 ProSiteProfiles Glutathione peroxidase profile. 23 194 IPR000889 GO:0004602|GO:0006979
Lele50g0663 200 ProSiteProfiles Thioredoxin domain profile. 27 189 IPR013766 -
Lele50g0663 200 Gene3D Glutaredoxin 23 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0663 Lele-ChrLele50 4068642 4072210 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0663 50 4068642 4072210 Lele50g0663 50 4068642 4072210 ECH
Lele50g0663 50 4068642 4072210 Lele51g0652 51 3934727 3938876 hybridization
Lele50g0663 50 4068642 4072210 Lele52g0655 52 4142363 4144787 hybridization