Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0634 ATGACTACCGAACACGCCAATCCAAAATCGGTGTACAATTTTGTTGTCAAGGATGCTAAGGGAAACGATGTTGAGCTTGCTACTTACAGTGGAAAAGTGCTGCTCATCGTCAATGTTGCTTCCAAATGGTATAAACTTGATGATTCTTATTTGCTTCTTTCTTCATGTCTTTCTGAAGCTTATATCGTACTATTATTATTCATTGTTTGGGATGGAGGCAGTGGTTTGACCAACTCAAATTATGCGGAGTTGAATGAATTATATGACAAGTATAAAGATAAAGGTCTGGAGATTCTGGGATTCCCATGCAATCAGCTTGGTGAATTGGAACCCGGAAGCAATGATGAAATTGTGGAGTTTGTTTGCACTCGCTTCAAATCAGAATTTCCCATCTTCCATAAGATTGAAGTGAATGGTGAGAATGCAGCTCCAGTGTACAAGTTCTTAAAATCATGCCAATGGGGAATTATAGGGGATGATATTCAGTGGAACTTCGCCAAATTTCTAGTTGACAAGAACGGCCAAGCAGTAGATCGCTATTATCCCACCACTTCTCCTCTCAGCCTTGAGCTTTATGAATGTTTGCAACATCGAAAGGGACGTGTTTATCCCTCCTATTATGATGTTTTGTGA 633 0.3981 MTTEHANPKSVYNFVVKDAKGNDVELATYSGKVLLIVNVASKWYKLDDSYLLLSSCLSEAYIVLLLFIVWDGGSGLTNSNYAELNELYDKYKDKGLEILGFPCNQLGELEPGSNDEIVEFVCTRFKSEFPIFHKIEVNGENAAPVYKFLKSCQWGIIGDDIQWNFAKFLVDKNGQAVDRYYPTTSPLSLELYECLQHRKGRVYPSYYDVL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0634 210 Pfam Glutathione peroxidase 74 150 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 CDD GSH_Peroxidase 10 190 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 Gene3D Glutaredoxin 1 201 - -
Lele49g0634 210 PANTHER GLUTATHIONE PEROXIDASE 5 55 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 SUPERFAMILY Thioredoxin-like 9 42 IPR036249 -
Lele49g0634 210 PRINTS Glutathione peroxidase family signature 161 170 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 PRINTS Glutathione peroxidase family signature 29 46 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 FunFam Glutathione peroxidase 56 197 - -
Lele49g0634 210 PIRSF Glutathion_perox 57 198 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 PIRSF Glutathion_perox 1 69 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 ProSiteProfiles Glutathione peroxidase profile. 1 210 IPR000889 GO:0004602|GO:0006979
Lele49g0634 210 SUPERFAMILY Thioredoxin-like 65 190 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0634 Lele-ChrLele49 3829578 3830740 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0634 49 3829578 3830740 Lele49g0634 49 3829578 3830740 ECH
Lele49g0634 49 3829578 3830740 Lele51g0652 51 3934727 3938876 hybridization
Lele49g0634 49 3829578 3830740 Lele52g0655 52 4142363 4144787 hybridization