Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0651 ATGCTCAAAAATTTTATTACTTACATGGAAGCAGATAACCAAACGAGAAAGGAAAAATATGCTGTTGATATTTCCTCCATAAAGGAAGCACACGCCCGAATAAAATCATTGGTTCTTAGAACACCAGTTCATTCCTCTGAATCTCTGAATGCTATATCAGGAAGGCAGCTGTACTTTAATTGCGTCTTAACACACAGCAGTGGTAACCATGCTGCAGCATTGGCTTTGGCGGCAAAGCAAAGGGGGATCCCTGCATATATTGTAATTCCAAAAAGTGCCCCAACTTGCAAGGTTGAGAATGTAAAGCGTTATGGTGGTCAGGTTATATGGTCTGAAGCCTCTATGAAGTCCAGGGAGGAAACTGCAAAGAAAGTGTGGCAAGACTGCTATGAAGCAGGGTTCATTTCTGTGGACAGAACTAAAGCTATGAGATCTCAGGAATTAGCATTGTTCTCAGTGTCTGGGTACCGTATCATTGGAGCTACTGGAACAAGCTCCACAAATAGACACCCTAGTGGTGGTCTGATATCAGGAGTAGCATTGGCTGCCAAGTCCATCAACCCTGCTATACGTATTTTAGCTGCTGAACCTAAAGGAGCTGATGACGCTGCACAATCTAAAGCAGCCGGAAGGATAAATTACATTGCCTGA 651 0.4332 MLKNFITYMEADNQTRKEKYAVDISSIKEAHARIKSLVLRTPVHSSESLNAISGRQLYFNCVLTHSSGNHAAALALAAKQRGIPAYIVIPKSAPTCKVENVKRYGGQVIWSEASMKSREETAKKVWQDCYEAGFISVDRTKAMRSQELALFSVSGYRIIGATGTSSTNRHPSGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRINYIA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0651 216 FunFam Threonine dehydratase catabolic 45 138 - -
Lele52g0651 216 Gene3D - 8 61 IPR036052 -
Lele52g0651 216 Gene3D - 62 128 IPR036052 -
Lele52g0651 216 Gene3D - 170 215 IPR036052 -
Lele52g0651 216 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 13 61 - -
Lele52g0651 216 Pfam Pyridoxal-phosphate dependent enzyme 61 212 IPR001926 -
Lele52g0651 216 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 24 213 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0651 Lele-ChrLele52 4126091 4127597 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0651 52 4126091 4127597 Lele52g0651 52 4126091 4127597 ECH
Lele49g0630 49 3818638 3820590 Lele52g0651 52 4126091 4127597 hybridization
Lele50g0658 50 4035623 4039150 Lele52g0651 52 4126091 4127597 hybridization