Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0658 ATGCATTACAAAAATTCTAGGATGACATTTTGTAGAAGTCTTTTTCTTTATGGAGTTCTTGTGCTTTCCATCCAATTTTACAGATTTTGTGAAGTCCTGTTGATCACATTCTCCAAAATTAGTGGTAACCATGCTGCAGCATTGGCTTTGGCGGCAAAGCGAAGGGGGATCCCTGCATATATTGTAATTCCAAAAAGTGCCCCAACTTGCAAGGTTGAGAATGTAAAGCGTTATGGTGGTCAGGTTATACGGCCTGAAGCCTCTATGAAGTCCAGGGAGGAAACTGCAAACAAATGGCCAGGGTACCATATCGTTGGAGCTACTGGAACAAGCGCCACAAATAGACACCCTAGAGTAGCATGGGCTGCCAAGTCCATCAACCCTGCTATACGTATTTTAGCTGCTGAACCTAAAGGAGCTGATGACGCTGCACAATCTAAAGCACTGGGAAGGATAATTACATTGCCTGAAAACAATACCATAGCTGACGGGCTTAGAGCTTTTCTTGGAGATTTAGCATGTGGAGCGATTGGCCTTGCTGCTGTTATATCGGATGCTTTCCAGAAAATTCCTGCTTGGAAGGACTGCAAACATATAGGAATTGGCTCTTCTTCCTCATTGCTGGCAAAATGGTATTCTTTCTTTGCAAACGCAGCCTCTGGAATGGCCGTGAGCGACGAATGCAAATTGAGATTTCAGGAGCTAAAAGCAAGAAGGACCTACCGATTCATAGTTTTCAAAATTGAGCAACAAGAAGTGGTGGTTGATAAACTTGGAAGCTCAGCTCAAAGCTACAGTGACTTTACCTCCAGTTTGCCAGCTGATGAGTGCCGCTATGCCGTCTTCGATTTTGATTTCACAACTGAAGAGAATGTCCAGAAAAGCAAGATCTTCTTCATTGCATGGTCACCGGATTCATCAAAGGTGAGGATGAAGATGGTGTATGCAAGTTCCAAGGACAGATTCAAGAGAGAACTGGACGGCATTGCATTTGAGTTGCAAGCAACAGATCCGAGTGAGATGAGCATGGACATTGTGAAAGAGAGGGCCTTCTAA 1056 0.4403 MHYKNSRMTFCRSLFLYGVLVLSIQFYRFCEVLLITFSKISGNHAAALALAAKRRGIPAYIVIPKSAPTCKVENVKRYGGQVIRPEASMKSREETANKWPGYHIVGATGTSATNRHPRVAWAAKSINPAIRILAAEPKGADDAAQSKALGRIITLPENNTIADGLRAFLGDLACGAIGLAAVISDAFQKIPAWKDCKHIGIGSSSSLLAKWYSFFANAASGMAVSDECKLRFQELKARRTYRFIVFKIEQQEVVVDKLGSSAQSYSDFTSSLPADECRYAVFDFDFTTEENVQKSKIFFIAWSPDSSKVRMKMVYASSKDRFKRELDGIAFELQATDPSEMSMDIVKERAF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0658 351 SUPERFAMILY Actin depolymerizing proteins 217 349 - -
Lele50g0658 351 Gene3D - 118 210 IPR036052 -
Lele50g0658 351 PANTHER COFILIN-RELATED 216 350 IPR017904 GO:0015629|GO:0030042
Lele50g0658 351 SMART adf_2 226 351 IPR002108 GO:0003779
Lele50g0658 351 Gene3D - 31 105 IPR036052 -
Lele50g0658 351 Gene3D Severin 213 350 IPR029006 -
Lele50g0658 351 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 41 169 IPR036052 -
Lele50g0658 351 CDD ADF_cofilin_like 220 350 IPR017904 GO:0015629|GO:0030042
Lele50g0658 351 Pfam Pyridoxal-phosphate dependent enzyme 41 108 IPR001926 -
Lele50g0658 351 ProSiteProfiles ADF-H domain profile. 221 351 IPR002108 GO:0003779
Lele50g0658 351 Pfam Cofilin/tropomyosin-type actin-binding protein 228 349 IPR002108 GO:0003779
Lele50g0658 351 FunFam Actin-depolymerizing factor 2 215 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0658 Lele-ChrLele50 4035623 4039150 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0658 50 4035623 4039150 Lele50g0658 50 4035623 4039150 ECH
Lele50g0658 50 4035623 4039150 Lele51g0650 51 3925851 3928019 hybridization
Lele50g0658 50 4035623 4039150 Lele52g0651 52 4126091 4127597 hybridization