Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0630 ATGGAAGCATATAGCCAAGCGAGAAAGGAAAAATATGCTGCTGATATTTCCTCCATAAAGGAAGCACACGCCCGAATAAAATCATTGATTCATAGAACCCCTGTTCTTTCCTCTGAATCTCTGAATGCTATATCAGGAAGGCAGCTGTACTTTAAGTGTGAATGCTTCCAGAAGGGTGGAGCGTTTAAATTTAGAGGTGCCAGCAATGCTGTTTTCTCTCTTGATGATACTGATGCTTCCAAAGGTGTCTTAACGCACAGCAGTGGTAACCATGCTGCAGCATTGGCTTTGGCGGCAAAGCTAAGGGGGATCCCTGCATATATTGTAATTCCAAAAAATGCTCCAACTTGCAAGGTTGAGAATGTAAAGCGTTATGGTGGTCAGATTATCTGGTCTGAAGCCTCTGTGAAGTCCCGGGAGGAAATTGCAAACAAAGTGTGGCAAGAGACTGGTGCAAATCTTATACATCCATATAATGATGGACGTATTTTGAGTGGCCAGGGTACCATATCATTGGAGCTACTGGAACAAGCTCCACAAATAGACACCCTAGTAGTTCCCATTAGTGGTGGTGGTCTGATATCAGGAGTAGCATTGGCTGCCAAATCCATCAACCCTTCTATGCGTATTTTAGCTGCTGAACCTAAAGGAGCTGATGACGCTGCACAATCTAAAGCAGCCGGGAGGATAATTACATTGCCTGAAACCAATACTATAGCTGACGGACTTAGAGCTTTTCTTGGAGATTTAACATGGCCTGTGGTACGAGATCTTGTTGAAGACATAATAACTGTGGAAGACAGTGAAATAATGAAGGCCATGAAACTCTGTTTTGAGATTCTTAAGGTTGTCGTTGAACCAAGCGGAGCGATTGGCCTTGCTGCTGTTCTATCGGATGCTTTTCAGAAAAATCCTGCTTGGAAGGACTGCAGACATATTGGAATTGTAGTTTCAGGGGGCAATGTCGACCTTGGAGGGCTTTGGAAATCTTTGGAGAAATGA 1002 0.4371 MEAYSQARKEKYAADISSIKEAHARIKSLIHRTPVLSSESLNAISGRQLYFKCECFQKGGAFKFRGASNAVFSLDDTDASKGVLTHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKVENVKRYGGQIIWSEASVKSREEIANKVWQETGANLIHPYNDGRILSGQGTISLELLEQAPQIDTLVVPISGGGLISGVALAAKSINPSMRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDLTWPVVRDLVEDIITVEDSEIMKAMKLCFEILKVVVEPSGAIGLAAVLSDAFQKNPAWKDCRHIGIVVSGGNVDLGGLWKSLEK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0630 333 FunFam L-threonine dehydratase catabolic TdcB 132 323 - -
Lele49g0630 333 Gene3D - 25 323 IPR036052 -
Lele49g0630 333 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 324 IPR036052 -
Lele49g0630 333 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Lele49g0630 333 Pfam Pyridoxal-phosphate dependent enzyme 28 300 IPR001926 -
Lele49g0630 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 5 325 - -
Lele49g0630 333 CDD Thr-dehyd 16 323 - -
Lele49g0630 333 Gene3D - 62 158 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0630 Lele-ChrLele49 3818638 3820590 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0630 49 3818638 3820590 Lele49g0630 49 3818638 3820590 ECH
Lele49g0630 49 3818638 3820590 Lele51g0650 51 3925851 3928019 hybridization
Lele49g0630 49 3818638 3820590 Lele52g0651 52 4126091 4127597 hybridization