Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0217 ATGCTGGGGTGTCGCAGAAATCCCTCAGATAATCACCAATTTTCACACCAAGTCCAGCCACGGAGTTTCCCTCGCCTTTCTCCTCACTTGGGTCGCTGGGTTCGTGGTGGTCCTGAGAGAGACCTGGAGGTCTCAACTGGCTCAACTTGTGGCCAAAAAAATAAACTAGCAAGCTCAAATTTAAAACTGCGTGGCCCTCTCGTTTACACTATCTCCAACGCCATGATGCTCTCTGCATCATCATCCACCAATTGCTGCAAAGCTTGTACTATGATTACATCTACAGATGGTGCAGACGAAGATGAAGAGAGAAAACCATTGAGACCGAAACCAGGGCACGAGTCAGCGAGGTCCCTGGCTGGGAGTGGCACCCCACCGTTTCGCAACTACATGCGAGCGGCGAAGAGTGGCCCTTCCGCCTTGGAATTGAACTCTGACTCCTCCTCCGACGATGAGGCTCCTCCGTCTTACTCCGTCAACTCTCCTTCCCAACCTCGACCAATCCCTCGTTCTTACTCCGGAGGTTATGGGACATTCTTAGGAGCAGCGGTTAACTTGCCTGCTCAGGGCAATGCTCTAGCATTCACTGCAAGGAAACTCTTACAGGAGCAGGAGGCGCACAGTGCTTTTGGTCAATGGCTGGGATGGCTCATGGCTGCTATATATATGGGAGGCCGAATCCCTCAGATATGGTTGAATATTAAAAGAGGGAGTGTAGAGGGCTTAAACCCCTTCATGTTCGTCTTTGCTTTGATTGCCAATGTGACCTACGTGGCGAGTATTCTCGTACGAACTACTGAATGGGAGAGCATCAAAGCAAATATGCCATGGCTGTTGGATGCTGTAGTTTGCGTGGCTCTGGACCTATTCATAATAGTGCAGTACATCTATTACAGATACATCCGAAGGAGATGGCGAAGGGAAGAGAATGGTGGAGACTACAAAGAAGCGAGGAAAAGCGATGAATCGTGA 972 0.499 MLGCRRNPSDNHQFSHQVQPRSFPRLSPHLGRWVRGGPERDLEVSTGSTCGQKNKLASSNLKLRGPLVYTISNAMMLSASSSTNCCKACTMITSTDGADEDEERKPLRPKPGHESARSLAGSGTPPFRNYMRAAKSGPSALELNSDSSSDDEAPPSYSVNSPSQPRPIPRSYSGGYGTFLGAAVNLPAQGNALAFTARKLLQEQEAHSAFGQWLGWLMAAIYMGGRIPQIWLNIKRGSVEGLNPFMFVFALIANVTYVASILVRTTEWESIKANMPWLLDAVVCVALDLFIIVQYIYYRYIRRRWRREENGGDYKEARKSDES 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0217 323 MobiDBLite consensus disorder prediction 140 167 - -
Lele52g0217 323 MobiDBLite consensus disorder prediction 1 28 - -
Lele52g0217 323 MobiDBLite consensus disorder prediction 97 112 - -
Lele52g0217 323 MobiDBLite consensus disorder prediction 96 167 - -
Lele52g0217 323 MobiDBLite consensus disorder prediction 8 22 - -
Lele52g0217 323 Gene3D - 211 310 - -
Lele52g0217 323 SMART ctns 224 255 IPR006603 -
Lele52g0217 323 FunFam Vacuolar membrane PQ loop repeat protein 210 308 - -
Lele52g0217 323 Pfam PQ loop repeat 211 268 IPR006603 -
Lele52g0217 323 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 153 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0217 Lele-ChrLele52 1284581 1287504 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0200 49 1185972 1193698 Lele52g0217 52 1284581 1287504 hybridization
Lele50g0214 50 1263495 1266521 Lele52g0217 52 1284581 1287504 hybridization