Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0200 ATGGCGCCCTCTTACTGTGTGACGGAGAGAAAGTCATGCGTGCCCTGGGTTCAGAAGTACTTCAAGGACTGCCTCTGTAATCTCAAAGACGACTTCTCCTTCTCTTTCGGGCTCATCAGTCTCGTATGCTGGGGTGTCGCAGAAATTCCTCAGATAATCACCAACTTTCACACCAAGTCCAGCCATGGAGTTTCACTCGCCTTTCTCCTAACATGGGTCGCTGGAGATATATTCAATCTGGTGGGTTGTCTTCTGGAGCCAGCCACGCTGCCCACTCAATTATATACAGCTCTGCTGTATACAACAACTACTATTGTATTAGTGCTGCAAAGCTTGTACTATGATTACATCTACAAATGGTGCAGACGAAGTCGCCAAAAAATCAATAACCAAGGGGATGAAGAAGAGAAAAAACCGTTGAGACCGAAACCAAGACACGAGTCTGGAGTTCCCATACCAAATGGCACACACAAAACATCCCCTGCCCCTCGAAGAGAGATGTTCTATTATACGTCAGCGAGGTCTCTGGCTGGGAGTGGCACGCCCCCGTTTCGCAACTACATACGAGCAGCCAAGAGTGGCCCTTCCGCCCTGGAATTGAACTCTGACTCCTCCGACGATGAGGCCCCGCCGTCTTACTCCGTCATCTCTCCTTCCCAACCTCGACCAATCCCTCGTTCTTACGCCGGAGGTTATGGAACATTCTTAGCAGCAGCGGCTAACTTGCCTGCGCAAGGCCATGCTTTAGCATTCACTGCAAGGAAACTCTTACAGGAGCAAGAGGCGCAAAGTGTTTTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATATACATGGGAGGCCGACTCCCTCAGATATGGCTGAATATTAAAAGAGGGAGTGTAGAGGGCTTGAACCCCTTCATGTTCGTCTTTGCTTTGATTGCCAATGTTACCTACGTGGCGAGTATTCTGGTACGAACTATTGAATGGGAGAGCATCAAAGCAAATATGCCATGGTTATTGGATGCTGTAGTCTGCGTGGCTCTGGACCTATTTGCACCAAAAACACGATCGTTCAGTGTTCGTCATAGGAAGTTGGAAACAGCAGCACAGTCAGGCGACTTCTATTATAGTTTAAAATTGCGGGAAAGAAAACTAGGCTCGTCTAACAATTTTCATATCAACAAGTATGGAAGTCAGGGACCGTTTCAGTTTTTGGTGAATGAAACTGATCAATATGGTAGACAGAAAACAACAAACCCTATGTCTCTGGCTGTATTTACTGTACATTACAAGTCTAGAAATAACCATACGTCTGTCTCCTCCACAATCGGCCGGAAGTTACTGCAGCGCCATCTCCATCCCACACACGGGAAAAAGAAAAAAAATGAAGAAACGGATGTCCTACTCAAGCGTCGAGGGCCAAGGGCGTCTCTAGCAGATCGTAGGGAGCCCATAAGGCATCCAAGGGGCAGGGCCGGTTGGCGTCTAGCCGAACCCATGGTTTACCCTTCCCGCTCCAATGCAGCAGGCTCACCGGGCCCGGATGCAAATCCCTGCACAGCCCGCGAAAGTTGTCGCCGCCGAGCCCGTGTTGGTTCCACTTGTGATCCACCGGCGCTATTTTCCCGGCGAATACCAGCAGGAACGGCGGCAATGATCCCAACTCGTAGATCCGTGTTCTCTTCTGGAGCTCCATCCACTCCTCGATCTTCCTCGTGTAATCGCCTGCCCGCCAGCCCTCCAAATCGATCACCATCACCCCGTGCGGATGGAAGAGGAGATCAGTCCAGCGACGGTGAAGTCGTCGAAGGGGTAGATTCGGAATTTGAGGTAGGGGAAGGAGGCAGAGACGGTGAGGTTGAGGATGGAAACGGAAGAAGGCTTAGAAGTGGCGGAGACAAAATGGAAAACGACGTTCTCGGGACAGGAAGAGTGTTGGAGAACGGAGAGGATGGCGGCCATGGAGCCGCGAAGGTAGGTGACGTCGAGGGTCATTGCAATGTGGACGGCGTCGTTGGAGCAGTTGGGGGAGTTGTAGAACTTTGGGGCTTCTTTGAAGCGTGGAGCAGAGGGGAGAAGGATATGGATGTGGGAATAGATGCAGAGAGAGGAATGTGCGATTCAAATCGTTTTGAAAAGGGAAGAGGAAGACAGGGAGAGGGATCGGAGAAGAAGACAGTACAGAGGTCCAAGGCTCCCGAGGTTTCAGCGTGGCTTTGA 2205 0.5075 MAPSYCVTERKSCVPWVQKYFKDCLCNLKDDFSFSFGLISLVCWGVAEIPQIITNFHTKSSHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQLYTALLYTTTTIVLVLQSLYYDYIYKWCRRSRQKINNQGDEEEKKPLRPKPRHESGVPIPNGTHKTSPAPRREMFYYTSARSLAGSGTPPFRNYIRAAKSGPSALELNSDSSDDEAPPSYSVISPSQPRPIPRSYAGGYGTFLAAAANLPAQGHALAFTARKLLQEQEAQSVFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPFMFVFALIANVTYVASILVRTIEWESIKANMPWLLDAVVCVALDLFAPKTRSFSVRHRKLETAAQSGDFYYSLKLRERKLGSSNNFHINKYGSQGPFQFLVNETDQYGRQKTTNPMSLAVFTVHYKSRNNHTSVSSTIGRKLLQRHLHPTHGKKKKNEETDVLLKRRGPRASLADRREPIRHPRGRAGWRLAEPMVYPSRSNAAGSPGPDANPCTARESCRRRARVGSTCDPPALFSRRIPAGTAAMIPTRRSVFSSGAPSTPRSSSCNRLPASPPNRSPSPRADGRGDQSSDGEVVEGVDSEFEVGEGGRDGEVEDGNGRRLRSGGDKMENDVLGTGRVLENGEDGGHGAAKVGDVEGHCNVDGVVGAVGGVVELWGFFEAWSRGEKDMDVGIDAERGMCDSNRFEKGRGRQGEGSEKKTVQRSKAPEVSAWL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0200 734 Gene3D - 35 131 - -
Lele49g0200 734 Gene3D - 267 354 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 198 220 - -
Lele49g0200 734 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Lele49g0200 734 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 347 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 702 734 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 550 574 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 604 629 - -
Lele49g0200 734 FunFam Vacuolar membrane PQ loop repeat protein 266 361 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 541 633 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 129 164 - -
Lele49g0200 734 SMART ctns 280 311 IPR006603 -
Lele49g0200 734 SMART ctns 46 77 IPR006603 -
Lele49g0200 734 MobiDBLite consensus disorder prediction 129 145 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 498 518 - -
Lele49g0200 734 MobiDBLite consensus disorder prediction 702 725 - -
Lele49g0200 734 Pfam PQ loop repeat 32 88 IPR006603 -
Lele49g0200 734 Pfam PQ loop repeat 267 322 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0200 Lele-ChrLele49 1185972 1193698 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0200 49 1185972 1193698 Lele51g0217 51 1208906 1212104 hybridization
Lele49g0200 49 1185972 1193698 Lele52g0217 52 1284581 1287504 hybridization