Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0214 ATGGCGCCCTCTTACTGTGTTAGGGAGAGAAAGCCATGTGTGCCATGGGTTCAGAAGTACTTCAAGGACTGCCTCTGTAATCTCAAAGACGACTTCTCCTTCTCTTTCGGCCTCGTCAGTCTCGTATGCTGGGGTGTAGCAGAAATCCCTCAGATAATCACCAATTTTCACACCAAGTCCAGCCACGGAGTTTCCCTCGCCTTTCTCCTCACTTGGGTCGCTGGAGATATATTCAATCTGGTGGGTTGTCTTCTGGAGCCAGCCACGCTGCCCACTCAGTTATATACAGCTCTGCTGTATACAATAACTACCATTGTATTAGTGCTGCAAAGCTTGTACTATGATTACATCTACAGATGGTGCAGACGAAATCGTCAAAAAATCAGTAACCAAGAGGATGAAGAAGAGAGAAAACCGTTGAGACCGAAACGAGGGCACGAGTCTGGAGTTCCAATACCAAATGGCACACAGAAAACATCGCCGGCCCCTCGAAGAGAGATGTTCTATTATACGTCAGCGAGGTCTCTGGCTGGGAGTGGCACCCCACCGTTTCGCAACTACATGCGAGCGGCGAAGAGTGGCCCTTCCGCCTTGGAATTGAACTCTGACTCCTCCTCCGACGATGAGGCTCCTCCGTCTTACTCCGTCAACTCTCCTTCCCAACCTCGACCAATCCCTCGTTCTTACGCCGGAGGTTATGGGACATTCTTAGGAGCAGCGGTTAACTTGCCTGCTCAGGGCAATGCTCTAGCATTCTCTGCAAGGAAACTCTTACAGGAGCAGGAGGCGCACAGTGCTTTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATATATATGGGAGGCCGACTCCCTCAGATATGGTTGAATATTAAAAGAGGGAGTGTAGAGGGCTTAAACCCCTTCATGTTCGTCTTCGCTTTGATTGCCAATGTTACCTACGTGGCGAGTATTCTGGTACGAACTACTGAATGGGAGAGCATCAAAGCAAATATGCCATGGCTGTTGGATGCTGTAGTTTGCGTGGCTCTGGACCTATTTATAATAGTGCAGTACATCTATTACAGATACATCCGAAGGAGATGGCGAAGGGAAGAGAATGGTGGAGACTACAAAGAAGCGAGGAAAAGCGATGAATCGTGA 1143 0.4908 MAPSYCVRERKPCVPWVQKYFKDCLCNLKDDFSFSFGLVSLVCWGVAEIPQIITNFHTKSSHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQLYTALLYTITTIVLVLQSLYYDYIYRWCRRNRQKISNQEDEEERKPLRPKRGHESGVPIPNGTQKTSPAPRREMFYYTSARSLAGSGTPPFRNYMRAAKSGPSALELNSDSSSDDEAPPSYSVNSPSQPRPIPRSYAGGYGTFLGAAVNLPAQGNALAFSARKLLQEQEAHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPFMFVFALIANVTYVASILVRTTEWESIKANMPWLLDAVVCVALDLFIIVQYIYYRYIRRRWRREENGGDYKEARKSDES 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0214 380 MobiDBLite consensus disorder prediction 129 164 - -
Lele50g0214 380 Gene3D - 268 367 - -
Lele50g0214 380 Gene3D - 35 135 - -
Lele50g0214 380 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 359 - -
Lele50g0214 380 MobiDBLite consensus disorder prediction 129 145 - -
Lele50g0214 380 FunFam Vacuolar membrane PQ loop repeat protein 267 365 - -
Lele50g0214 380 MobiDBLite consensus disorder prediction 195 224 - -
Lele50g0214 380 SMART ctns 281 312 IPR006603 -
Lele50g0214 380 SMART ctns 46 77 IPR006603 -
Lele50g0214 380 MobiDBLite consensus disorder prediction 197 224 - -
Lele50g0214 380 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Lele50g0214 380 Pfam PQ loop repeat 268 325 IPR006603 -
Lele50g0214 380 Pfam PQ loop repeat 32 88 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0214 Lele-ChrLele50 1263495 1266521 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0214 50 1263495 1266521 Lele51g0217 51 1208906 1212104 hybridization
Lele50g0214 50 1263495 1266521 Lele52g0217 52 1284581 1287504 hybridization