Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0093 ATGGCGGACTCTGTGAAGCAAATCTTAGCAAAACCAATCCAGCTAGCCGACCAAGTAATCCAAGCTGCCGATGAGGCCAGCGCTTCCTTCAGGAATGAATGCGCAGAGCTCAAATCCAAGACGGAGAGACTCGCGGGACTTCTCCGGCAGGCCGCCAGAGCCAGCTCCGATCTCTACGAACGTCCTACGCGGCGGATCATCGAAGAAACCGAACAGGTCCTCACCAAAGCCCACTCCTTGATTCTCAAGTGCCGCGCCAATGGCCTGGTGAAGCGCGTGTTCACCATCATACCCGCCGCCGCTTTTCGCAAGATGTCCCTCCAACTCGAGAACTCAATCGGAGACGTGTCCTGGCTCCTTCGCGTGTCCGCTCCGGCGGAGGATCGCGGCGACGAGTATCTAGGTCTTCCTCCGATCGCCGCAAACGAACCGAATCTGTATCTCATATGGGAGCAAGTCGCGACACTTTACACGGGTTCTCTGGAGGAGCGATCTGATGCGGCGGCTTCGCTGGTATCACTCGCTAGGGACAACGATCGATACGCGAAGTTGATAATTGAGGAAGGTGGCGTTGGACCGCTGTTGAAATTGCTCAAAGATGGGAAGATGGAAGGTCAAGAGAATGCCGCGAGAGCAATTGGGCTTCTGGGACGTGACCCCGAGAGCGTGGAGCACCTGCTCCATGCCGGAATATGCTCTGTGTTTGCGAAAATCCTTAAAGATGGTCCCATGAAAGTGCAAGCTGAGGTGGCCTCGGCTGTGTCGGAGCTGGCGGCGAATTATCCCAAATGCCAAGATCTCTTCGCTCAGCACAATACCATCCGATTGCTCGTTAGCCATCTTGCATTCGAAACCGTTCAAGAACACAGTAAGTATGCCATTGATCGCATCAAACCCACATCAATCCACGCGGTTGTGATTGCAAGTAGTAATTCTAATTCTAATCCAAACAACACCAATGCCAAGAAGTCCAACGAAGACGACGAGAACCAGATTCAGAGTCGGATAGCACATCCATTGGGCAATGAAACAGCTTCTCAGCTGCACAGAGTGATCACGAGTACCATGGCGATGAATTCTACTTCCAAGCCTAATGAAGGAAACGGAGGGAATCAGAGCTGCCAAACCAGTCAACCCAAGAGCAATGGTCAGAGTAACGGGAAGCAGACTCATCAGCCGCATCACCAGCCAAGCTATTCACATTCGGGGATTAACATGAAGGGAAGGGAACTAGAGAGCCCTGAGACTAAGGCCAAAATGAAAGCAATGGCGGCAAGAGCGCTGTGGCACCTAGCCAAGGGTAACTCCCCCATCTGTCGTAGCATCACAGAATCGAGGGCTCTGCTGTGCTTTGCAGTACTCCTTGAGAAAGGACGTGAAGATGTGCAGTACAATTCTGCCATGGCAGTGATGGAGATTACTGCAGTGGCAGAGAAAGATGCTGATCTCAGAAGATCTGCGTTCAAGCCCAACTCTCCTGCATGCAAAGCAGTTGTTGATCAAGTGCTTAAGATCATAGAGAAGGCAGATTCAGACCTGTTGATCCCTTGCATGAAGGCTATTGGGAATTTAGCGAGGACATTCAGAGCAACGGAGACATGGATGATTGCTCCTTTGGTGCGACTTTTGGATGAAAGAGACGCAGAGGTATCAAGAGAGGCATGCATAGCCCTCACCAAGTTTGCCTGCTCGGAGAACTACCTTCACCTGGATCACTCCAAGGCCATAATAAGTGCCGGTGGGGCAAAACATCTGGTACAGCTTGTGTATTTTGGAGAACAAATCGTTCAGATGTCAGCAGTAGTTTTGCTCTGCTACATTGCGCTTCATGTCCCAGACAATGAAGAACTGGCCGAGGCTGAGGTACTGACGGTGCTGGAATGGGCATCCAAGCAATCCTCCATGACGCAGGATGAAACAATCGAGGTGTTGTTGCAAGAAGCCAAGGGTAGGTTGGAGCTTTACCAGTCCAGAGGTTCCAGAGGATTCCATTGA 1995 0.5148 MADSVKQILAKPIQLADQVIQAADEASASFRNECAELKSKTERLAGLLRQAARASSDLYERPTRRIIEETEQVLTKAHSLILKCRANGLVKRVFTIIPAAAFRKMSLQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPNLYLIWEQVATLYTGSLEERSDAAASLVSLARDNDRYAKLIIEEGGVGPLLKLLKDGKMEGQENAARAIGLLGRDPESVEHLLHAGICSVFAKILKDGPMKVQAEVASAVSELAANYPKCQDLFAQHNTIRLLVSHLAFETVQEHSKYAIDRIKPTSIHAVVIASSNSNSNPNNTNAKKSNEDDENQIQSRIAHPLGNETASQLHRVITSTMAMNSTSKPNEGNGGNQSCQTSQPKSNGQSNGKQTHQPHHQPSYSHSGINMKGRELESPETKAKMKAMAARALWHLAKGNSPICRSITESRALLCFAVLLEKGREDVQYNSAMAVMEITAVAEKDADLRRSAFKPNSPACKAVVDQVLKIIEKADSDLLIPCMKAIGNLARTFRATETWMIAPLVRLLDERDAEVSREACIALTKFACSENYLHLDHSKAIISAGGAKHLVQLVYFGEQIVQMSAVVLLCYIALHVPDNEELAEAEVLTVLEWASKQSSMTQDETIEVLLQEAKGRLELYQSRGSRGFH 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0093 664 FunFam Armadillo repeat only 2 151 322 - -
Lele52g0093 664 SMART arm_5 219 259 IPR000225 GO:0005515
Lele52g0093 664 SMART arm_5 177 218 IPR000225 GO:0005515
Lele52g0093 664 SMART arm_5 435 475 IPR000225 GO:0005515
Lele52g0093 664 SMART arm_5 523 563 IPR000225 GO:0005515
Lele52g0093 664 SMART arm_5 569 609 IPR000225 GO:0005515
Lele52g0093 664 MobiDBLite consensus disorder prediction 359 403 - -
Lele52g0093 664 Pfam Armadillo/beta-catenin-like repeat 179 215 IPR000225 GO:0005515
Lele52g0093 664 PANTHER ARMADILLO REPEAT ONLY 4 1 660 - -
Lele52g0093 664 FunFam Armadillo repeat only 4 2 122 - -
Lele52g0093 664 Gene3D - 151 323 IPR011989 -
Lele52g0093 664 Coils Coil 20 40 - -
Lele52g0093 664 MobiDBLite consensus disorder prediction 359 416 - -
Lele52g0093 664 Gene3D - 409 489 IPR011989 -
Lele52g0093 664 MobiDBLite consensus disorder prediction 308 331 - -
Lele52g0093 664 FunFam Armadillo repeat only 2 398 652 - -
Lele52g0093 664 SUPERFAMILY ARM repeat 155 642 IPR016024 -
Lele52g0093 664 Gene3D - 2 122 IPR036537 GO:0007166
Lele52g0093 664 Gene3D - 490 644 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0093 Lele-ChrLele52 560601 562595 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0078 49 477800 479797 Lele52g0093 52 560601 562595 hybridization
Lele50g0094 50 584216 586216 Lele52g0093 52 560601 562595 hybridization