Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0094 ATGGCAGACTCTTTGAAGCAAATCTTAGCAAAACCAATCCAGCTAGCCGACCAAGTAATCCAAGCTGCCGATGAGGCCAGCGCTTCCTTCAGGAACGAATGCGCAGAGCTCAAATCCAAGACCGAGAGACTCGCAGGCCTTCTCCGGCAGGCCGCCAGAGCTAGCTCCGATCTCTACGAACGTCCTACGCGGCGGATCATCGAAGAAACCGAACAGGTCCTCACCAAAGCCTACTCCTTGATTCTCAAGTGCCGCGCTAATGGCCTGGTAAAGCGCGTGTTCACCATCATACCCGCCGCCGCTTTTCGCAAGATGTCCATCCAACTCGAGAACTCAATCGGAGACGTGTCCTGGCTTCTTCGCGTGTCCGCTCCGGCGGAGGATCGCGGCGACGAGTATCTGGGTCTTCCTCCGATCGCCGCAAACGAACCGAATCTGTATCTCATATGGGAGCAAGTCGCGACACTTTACACGGGTTCTCTGGAGGAGCGATCTGATGCGGCGGCTTCGCTGGTATCACTCGCTAGGGACAACGATCGATACGCGAAGTTGATAATCGAGGAAGGTGGCGTTGGACCGCTATTGAAATTGCTCAAAGATGGTAAGATGGAAGGTCAAGAGAATGCCGCGAAAGCAATTGGGCTTCTGGGTCGTGACCCGGAGAGCGTGGAGCACCTGCTCCACGCCGGAATATGCTCCGGGTTTGCGAAAATCCTTAAAGATGGTCCCATGAAAGTGCAAGCTGAGGTGGCCTCGGCTGTGTCGGAGCTGGCGGCGAATTATCCCAAATGCCAAGATCTCTTCGCTCAGCACAATATCATCCGATTGCTCGTCAGCCATCTTGCATTCGAAACCGTTCAAGAACACAGTAAGTATGCCATTGATCGCATCAAACCCACATCAATCCACGCGGTTGTGATTGCAAGTAGTAATTCTAATTCTAATCCAAACAACACCAATGCCAAGAAGTCCAACGACGACGACGAGAACCAGATTCATAGTCGGATAGCACATCCATTGGGCAATGGAACAGCTTCTCAGCTGCACAGAGTGATCACGAGTACCATGGCGATGAATTCTACTTCCAAGCCTAATGAAGGTAACGGAGGGAATCAGAACTGCCAAACTAGTCAACCCAAGAGCAATGGGCAGAGTCAGATTAACGGGAAGCAGACTCATCAGCCGCATCACCAGCCGAGCTATTCACATTCGGGGATTAACATGAAGGGAAGGGAACTAGAGAGCCCTGAGACTAAGGCCAAAATGAAAGCAATGGCGGCAAGAGCGCTTTGGCACCTAGCCAAGGGTAACTCACCCATCTGTCGTAGCATCACAGAATCGAGGGCTCTGCTGTGCTTTGCAGTACTCCTTGAGAAAGGACGTGAAGATGTGCAGTACAATTCTGCCATGGCAGTGATGGAGATTACTGCAGTGGCAGAGAAAGATGCTGATCTCAGAAGATCTGCATTCAAGCCCAACTCTCCTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATCATAGAGAAGGCAGATTCAGACCTGTTGGTCCCTTGCATGAAGGCTATTGGGAATTTAGCGAGGACATTCAGAGCAACGGAGACATGGATGATTGCTCCTTTGGTGCGACTTTTGGATGAAAGAGACGCAGAGGTATCAAGAGAGGCATGCATAGCTCTCACCAAATTTTCCTGCTCGGAGAACTACCTTCACCTGGATCACTCCAAGGCCATAATAAGCGCCGGTGGGGCAAAACATCTGGTACAGCTTGTGTATTTTGGAGAACAAATCGTTCAGATGTCAGCAGTAGTTTTGCTCTGCTACATTGCGCTTCATGTCCCAGACAGCGAAGAACTGGCCAAGGCTGAGGTACTGACGGTGCTGGAATGGGCATCCAAGCAATCCTCCATGACGCAGGATGAAACAATCGAGGTGCTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTACCAGTCCAGAGGTTCCAGAGGATTCCATTGA 2001 0.5112 MADSLKQILAKPIQLADQVIQAADEASASFRNECAELKSKTERLAGLLRQAARASSDLYERPTRRIIEETEQVLTKAYSLILKCRANGLVKRVFTIIPAAAFRKMSIQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPNLYLIWEQVATLYTGSLEERSDAAASLVSLARDNDRYAKLIIEEGGVGPLLKLLKDGKMEGQENAAKAIGLLGRDPESVEHLLHAGICSGFAKILKDGPMKVQAEVASAVSELAANYPKCQDLFAQHNIIRLLVSHLAFETVQEHSKYAIDRIKPTSIHAVVIASSNSNSNPNNTNAKKSNDDDENQIHSRIAHPLGNGTASQLHRVITSTMAMNSTSKPNEGNGGNQNCQTSQPKSNGQSQINGKQTHQPHHQPSYSHSGINMKGRELESPETKAKMKAMAARALWHLAKGNSPICRSITESRALLCFAVLLEKGREDVQYNSAMAVMEITAVAEKDADLRRSAFKPNSPACKAVVDQVLKIIEKADSDLLVPCMKAIGNLARTFRATETWMIAPLVRLLDERDAEVSREACIALTKFSCSENYLHLDHSKAIISAGGAKHLVQLVYFGEQIVQMSAVVLLCYIALHVPDSEELAKAEVLTVLEWASKQSSMTQDETIEVLLQEAKSRLELYQSRGSRGFH 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0094 666 PANTHER ARMADILLO REPEAT ONLY 4 1 662 - -
Lele50g0094 666 FunFam Armadillo repeat only 4 2 122 - -
Lele50g0094 666 MobiDBLite consensus disorder prediction 359 405 - -
Lele50g0094 666 MobiDBLite consensus disorder prediction 308 330 - -
Lele50g0094 666 FunFam Armadillo repeat only 2 151 322 - -
Lele50g0094 666 Pfam Armadillo/beta-catenin-like repeat 179 215 IPR000225 GO:0005515
Lele50g0094 666 SUPERFAMILY ARM repeat 155 646 IPR016024 -
Lele50g0094 666 FunFam Armadillo repeat only 2 400 654 - -
Lele50g0094 666 Coils Coil 20 40 - -
Lele50g0094 666 Gene3D - 151 321 IPR011989 -
Lele50g0094 666 MobiDBLite consensus disorder prediction 359 416 - -
Lele50g0094 666 Gene3D - 492 647 IPR011989 -
Lele50g0094 666 SMART arm_5 437 477 IPR000225 GO:0005515
Lele50g0094 666 SMART arm_5 571 611 IPR000225 GO:0005515
Lele50g0094 666 SMART arm_5 177 218 IPR000225 GO:0005515
Lele50g0094 666 SMART arm_5 219 259 IPR000225 GO:0005515
Lele50g0094 666 SMART arm_5 525 565 IPR000225 GO:0005515
Lele50g0094 666 Gene3D - 411 491 IPR011989 -
Lele50g0094 666 Gene3D - 3 122 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0094 Lele-ChrLele50 584216 586216 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0094 50 584216 586216 Lele51g0089 51 507559 509562 hybridization
Lele50g0094 50 584216 586216 Lele52g0093 52 560601 562595 hybridization